RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 LRRC37A5PQ49AS3 106 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 PRNTQ86SH4 94 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 ZFP82Q8N141 532 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 C15orf54Q8N8G6 183 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 ARL2-SNX15V9GYD0 113 aa3.18□□□□□ -1.9
R3HDM1-218ENST00000487294 IGHV3-64A0A075B6Q5 118 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 TRBV6-1A0A0K0K1D8 114 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 B4DEV8 164 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 HMGB3O15347 200 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 PTTG1O95997 202 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 CXorf1O96002 111 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 MBP02144 154 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 ANGP03950 147 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 CXCL1P09341 107 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 CDC34P49427 236 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 RBX1P62877 108 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 SRSF9Q13242 221 aaKnown RBP eCLIP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 IQCJQ1A5X6 159 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 ZNF674Q2M3X9 581 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 FAM74A4Q5TZK3 123 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 MZT2BQ6NZ67 158 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 NTM-AS1Q6ZSK4 140 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 OPRPNQ99935 248 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 NKX6-2Q9C056 277 aaPredicted RBP3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 TNFSF18Q9UNG2 199 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 PHLDA3Q9Y5J5 127 aa3.17□□□□□ -1.9
R3HDM1-218ENST00000487294 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 PHOX2AO14813 284 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 SH2D1AO60880 128 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 TPT1P13693 172 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 SNRPEP62304 92 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 PNRC1Q12796 327 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 FAM162BQ5T6X4 162 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 SPINK6Q6UWN8 80 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 Q86TA4 180 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 LINC00269Q8N2A0 174 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 C7orf33Q8WU49 177 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 TCEAL7Q9BRU2 100 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 MARVELD1Q9BSK0 173 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 SMIM3Q9BZL3 60 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 DPH3P1Q9H4G8 78 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 KIF25-AS1Q9Y6Z4 181 aa3.16□□□□□ -1.9
R3HDM1-218ENST00000487294 IGLV10-54A0A075B6I4 117 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 TRBV25-1A0A075B6N4 114 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 TRAV34A0A0B4J273 112 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 M0R036 132 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 M0R381 172 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 PEX7O00628 323 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 SNAI2O43623 268 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 LTAP01374 205 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 CHTF8P0CG12 524 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 ATP6V0CP27449 155 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 REG3AQ06141 175 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 REG3GQ6UW15 175 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 FMC1Q96HJ9 113 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 MED28Q9H204 178 aa3.15□□□□□ -1.91
R3HDM1-218ENST00000487294 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 FAM74A7A6NL05 159 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 INMT-MINDY4F8WBC2 141 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 NDUFS6O75380 124 aaKnown RBP3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 FHITP49789 147 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 AQP10Q96PS8 301 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 DERL1Q9BUN8 251 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 LINC00474Q9P2X8 69 aa3.14□□□□□ -1.91
R3HDM1-218ENST00000487294 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 IGHV1-24A0A0C4DH33 117 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 CTXND1A0A1B0GTU2 59 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 M0QY20 66 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 UPK1BO75841 260 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 IFNA7P01567 189 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 RPS10P46783 165 aaKnown RBP3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 COX6A2Q02221 97 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 ZNF56Q15929 161 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 ZNF726P1Q15940 193 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 CFAP161Q6P656 301 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 OR10AG1Q8NH19 301 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 ENKURQ8TC29 256 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 S100ZQ8WXG8 99 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 DPH3Q96FX2 82 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 PGLYRP4Q96LB8 373 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 ZNF471Q9BX82 626 aaPredicted RBP3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 NDUFA13Q9P0J0 144 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 LPAP08519 4548 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 MUC2Q02817 5179 aa3.13□□□□□ -1.91
R3HDM1-218ENST00000487294 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms