RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 MIAQ16674 131 aa12.36□□□□□ -0.43
HSPG2-210ENST00000481644 CLPSL2Q6UWE3 100 aa12.36□□□□□ -0.43
HSPG2-210ENST00000481644 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-210ENST00000481644 UBE2L6O14933 153 aa12.35□□□□□ -0.43
HSPG2-210ENST00000481644 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
HSPG2-210ENST00000481644 KRTAP4-5Q9BYR2 181 aa12.35□□□□□ -0.43
HSPG2-210ENST00000481644 PRR34Q9NV39 138 aa12.35□□□□□ -0.43
HSPG2-210ENST00000481644 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
HSPG2-210ENST00000481644 RIGQ13278 110 aa12.34□□□□□ -0.43
HSPG2-210ENST00000481644 Q8N1X5 172 aa12.34□□□□□ -0.43
HSPG2-210ENST00000481644 NUP35Q8NFH5 326 aa12.34□□□□□ -0.43
HSPG2-210ENST00000481644 TMEM191AQ9H0A3 160 aa12.34□□□□□ -0.43
HSPG2-210ENST00000481644 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
HSPG2-210ENST00000481644 A0A1B0GUV1 79 aa12.32□□□□□ -0.44
HSPG2-210ENST00000481644 SDHAF1A6NFY7 115 aa12.32□□□□□ -0.44
HSPG2-210ENST00000481644 XGP55808 180 aa12.32□□□□□ -0.44
HSPG2-210ENST00000481644 RAB14P61106 215 aa12.32□□□□□ -0.44
HSPG2-210ENST00000481644 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
HSPG2-210ENST00000481644 PCLOQ9Y6V0 5065 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 NCR2O95944 276 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 RAB4AP20338 218 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 REG3AQ06141 175 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 AMN1Q8IY45 258 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
HSPG2-210ENST00000481644 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 SMIM27A0A1W2PRY6 76 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 MRAP2Q96G30 205 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 ST20Q9HBF5 79 aa12.3□□□□□ -0.44
HSPG2-210ENST00000481644 I3L3M4 83 aa12.29□□□□□ -0.44
HSPG2-210ENST00000481644 APCSP02743 223 aa12.29□□□□□ -0.44
HSPG2-210ENST00000481644 PMCHP20382 165 aa12.29□□□□□ -0.44
HSPG2-210ENST00000481644 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
HSPG2-210ENST00000481644 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.45
HSPG2-210ENST00000481644 USP17L23D6RBM5 183 aa12.27□□□□□ -0.45
HSPG2-210ENST00000481644 RPS10P46783 165 aaKnown RBP12.27□□□□□ -0.45
HSPG2-210ENST00000481644 HAMPP81172 84 aa12.27□□□□□ -0.45
HSPG2-210ENST00000481644 AMMECR1LQ6DCA0 310 aa12.27□□□□□ -0.45
HSPG2-210ENST00000481644 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-210ENST00000481644 TRAV8-4A0A0B4J246 113 aa12.26□□□□□ -0.45
HSPG2-210ENST00000481644 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-210ENST00000481644 KRTAP26-1Q6PEX3 210 aa12.26□□□□□ -0.45
HSPG2-210ENST00000481644 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
HSPG2-210ENST00000481644 H7C423 109 aa12.25□□□□□ -0.45
HSPG2-210ENST00000481644 CAMPP49913 170 aa12.25□□□□□ -0.45
HSPG2-210ENST00000481644 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
HSPG2-210ENST00000481644 FAM30AQ9NZY2 134 aa12.25□□□□□ -0.45
HSPG2-210ENST00000481644 A0A1B0GW15 77 aa12.24□□□□□ -0.45
HSPG2-210ENST00000481644 EPM2AB3EWF7 344 aa12.24□□□□□ -0.45
HSPG2-210ENST00000481644 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
HSPG2-210ENST00000481644 TMEM242Q9NWH2 141 aa12.24□□□□□ -0.45
HSPG2-210ENST00000481644 PPP1R17O96001 155 aa12.23□□□□□ -0.45
HSPG2-210ENST00000481644 TSHBP01222 138 aa12.23□□□□□ -0.45
HSPG2-210ENST00000481644 FGF6P10767 208 aa12.23□□□□□ -0.45
HSPG2-210ENST00000481644 POLR2KP53803 58 aaKnown RBP12.23□□□□□ -0.45
HSPG2-210ENST00000481644 FAM104BQ5XKR9 115 aa12.23□□□□□ -0.45
HSPG2-210ENST00000481644 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
HSPG2-210ENST00000481644 TRBV27A0A0K0K1C4 114 aa12.22□□□□□ -0.45
HSPG2-210ENST00000481644 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
HSPG2-210ENST00000481644 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
HSPG2-210ENST00000481644 MRPL54Q6P161 138 aaKnown RBP12.22□□□□□ -0.45
HSPG2-210ENST00000481644 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-210ENST00000481644 S100A8P05109 93 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 ESDP10768 282 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 HBBP68871 147 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-210ENST00000481644 Q6ZSA8 131 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 NRACQ8N912 160 aa12.21□□□□□ -0.45
HSPG2-210ENST00000481644 VCYO14598 125 aa12.2□□□□□ -0.46
HSPG2-210ENST00000481644 PRSS1P07477 247 aa12.2□□□□□ -0.46
HSPG2-210ENST00000481644 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-210ENST00000481644 SUMO2P61956 95 aaKnown RBP12.2□□□□□ -0.46
HSPG2-210ENST00000481644 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
HSPG2-210ENST00000481644 BTF3L4Q96K17 158 aa12.2□□□□□ -0.46
HSPG2-210ENST00000481644 ABCA13Q86UQ4 5058 aa12.2□□□□□ -0.46
HSPG2-210ENST00000481644 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
HSPG2-210ENST00000481644 F8W036 122 aa12.19□□□□□ -0.46
HSPG2-210ENST00000481644 Q5VSD8 79 aa12.19□□□□□ -0.46
HSPG2-210ENST00000481644 LINC00862A6NCI5 91 aa12.18□□□□□ -0.46
HSPG2-210ENST00000481644 FCER1GP30273 86 aa12.18□□□□□ -0.46
HSPG2-210ENST00000481644 CKS2P33552 79 aa12.18□□□□□ -0.46
HSPG2-210ENST00000481644 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
HSPG2-210ENST00000481644 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 IFITM2Q01629 132 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 OR5A1Q8NGJ0 315 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
HSPG2-210ENST00000481644 MT-ND4LP03901 98 aa12.16□□□□□ -0.46
HSPG2-210ENST00000481644 ATP5L2Q7Z4Y8 100 aa12.16□□□□□ -0.46
HSPG2-210ENST00000481644 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
HSPG2-210ENST00000481644 FAM229AH3BQW9 127 aa12.15□□□□□ -0.46
HSPG2-210ENST00000481644 MRPL52Q86TS9 123 aaKnown RBP12.15□□□□□ -0.46
HSPG2-210ENST00000481644 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-210ENST00000481644 ANAPC16Q96DE5 110 aa12.15□□□□□ -0.46
HSPG2-210ENST00000481644 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms