RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 TEP1Q99973 2627 aaKnown RBP-1.25□□□□□ -2.61
R3HDM1-214ENST00000480793 LYSTQ99698 3801 aa-1.25□□□□□ -2.61
R3HDM1-214ENST00000480793 PAPPAQ13219 1627 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 PRDM2Q13029 1718 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 E2F6O75461 281 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 DPM2O94777 84 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 TOMM20LQ6UXN7 152 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 NBASA2RRP1 2371 aa-1.26□□□□□ -2.61
R3HDM1-214ENST00000480793 ANK3Q12955 4377 aaKnown RBP-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 CUBNO60494 3623 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 LOC730098B7Z3J9 87 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 J3KT08 172 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 PFDN1O60925 122 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 PITX3O75364 302 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 C9orf116Q5BN46 136 aaPredicted RBP-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 CDC26Q8NHZ8 85 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 AGPAT4-IT1Q9H0P7 198 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 CALML5Q9NZT1 146 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 SPG11Q96JI7 2443 aa-1.27□□□□□ -2.61
R3HDM1-214ENST00000480793 COL12A1Q99715 3063 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 FXYD6-FXYD2A0A087WZ82 144 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 BORCS7-ASMTA0A0B4J1R7 106 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 TNFSF15O95150 251 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 RBP4P02753 201 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 RPS28P62857 69 aaKnown RBP-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 SAMD13Q5VXD3 122 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 BAGE3Q86Y29 109 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 OR8I2Q8N0Y5 310 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 TMEM35BQ8NCS4 154 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 TACC2O95359 2948 aa-1.28□□□□□ -2.61
R3HDM1-214ENST00000480793 PBRM1Q86U86 1689 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 ERCC6L2Q5T890 1561 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 MYO18BQ8IUG5 2567 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 FASNP49327 2511 aaKnown RBP-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 M0R2T5 61 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 SMIM24O75264 130 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 PIRTP0C851 137 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 UBE2G1P62253 170 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 MIC13Q5XKP0 118 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 NPVFQ9HCQ7 196 aa-1.29□□□□□ -2.62
R3HDM1-214ENST00000480793 DYNC1H1Q14204 4646 aaKnown RBP-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 TRAV36DV7A0A075B6V5 113 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 TRBV6-1A0A0K0K1D8 114 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 E5RI56 91 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 M0R129 80 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 NPFFO15130 113 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 CCL18P55774 89 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 DCDP81605 110 aaKnown RBP-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 TFAMQ00059 246 aaKnown RBP-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 PPP1R2P3Q6NXS1 205 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 SDF2Q99470 211 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 HIGD1AQ9Y241 93 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 BICRAQ9NZM4 1560 aa-1.3□□□□□ -2.62
R3HDM1-214ENST00000480793 CMYA5Q8N3K9 4069 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 PRRC2CQ9Y520 2896 aaKnown RBP-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 TRBV20-1A0A075B6N2 111 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 A0A1B0GX51 115 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 FAM92AA1XBS5 289 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 APOC4-APOC2K7ER74 178 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 SCTP09683 121 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 RPRMQ9NS64 109 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 LRRC37A3O60309 1634 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 ADGRB1O14514 1584 aa-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 DSPP15924 2871 aaKnown RBP-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 NIPBLQ6KC79 2804 aaeCLIP-1.31□□□□□ -2.62
R3HDM1-214ENST00000480793 VPS13BQ7Z7G8 4022 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 YPEL1O60688 119 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 SPANXN1Q5VSR9 72 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 VSTM2AQ8TAG5 236 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 LINC00472Q9H8W2 130 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 LINC00312Q9Y6C7 94 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 IQSEC2Q5JU85 1478 aa-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 KDM5AP29375 1690 aaKnown RBP-1.32□□□□□ -2.62
R3HDM1-214ENST00000480793 ARHGEF10O15013 1369 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 HTTP42858 3142 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 KNL1Q8NG31 2342 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 COX6B1P14854 86 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 ZNF818PQ6ZRF7 136 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 LRRC37A2A6NM11 1700 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 LAMA1P25391 3075 aa-1.33□□□□□ -2.62
R3HDM1-214ENST00000480793 SPTBN4Q9H254 2564 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 WDR7Q9Y4E6 1490 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 FAM236AA0A1B0GUQ0 79 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 FAM236BA0A1B0GV22 79 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 M0R135 149 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 KLK9Q2XQG4 91 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 TCTE3Q8IZS6 198 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 SBF2Q86WG5 1849 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 CASKIN1Q8WXD9 1431 aa-1.34□□□□□ -2.62
R3HDM1-214ENST00000480793 REV3LO60673 3130 aa-1.35□□□□□ -2.62
R3HDM1-214ENST00000480793 MRC1P22897 1456 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 A0A1B0GV72 72 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 FABP1P07148 127 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 S100GP29377 79 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 CMPK1P30085 196 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 PIGYQ3MUY2 71 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 DEFB123Q8N688 67 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 SPTSSBQ8NFR3 76 aa-1.35□□□□□ -2.63
R3HDM1-214ENST00000480793 NWD2Q9ULI1 1742 aa-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms