RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 FRAS1Q86XX4 4008 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 CHD3Q12873 2000 aaKnown RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 ATP6V1G2-DDX39BF2Z307 99 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 ANGP03950 147 aaKnown RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 MRPS36P82909 103 aaKnown RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 CIRBPQ14011 172 aaKnown RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 SMIM21Q3B7S5 101 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 RPL13AP3Q6NVV1 102 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 C3orf62Q6ZUJ4 267 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 OR5AS1Q8N127 324 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 TEX29Q8N6K0 151 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 OR8J3Q8NGG0 315 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 ZNF431Q8TF32 576 aaPredicted RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 PRELID3AQ96N28 172 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 PFDN5Q99471 154 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 C2orf88Q9BSF0 95 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
NF1-209ENST00000479536 NCOA6Q14686 2063 aaPredicted RBP1.22□□□□□ -2.21
NF1-209ENST00000479536 PKDREJQ9NTG1 2253 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 TRAV13-1A0A0B4J241 112 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 TRBV7-6A0A0J9YX20 115 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 TRBV27A0A0K0K1C4 114 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 C9orf170A2RU37 121 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 ARL5CA6NH57 179 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 C5orf67F2Z3F1 127 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 F8W1H4 67 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 K7EP13 123 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 CCL25O15444 150 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 FABP4P15090 132 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 ZNF25P17030 456 aaPredicted RBP1.21□□□□□ -2.22
NF1-209ENST00000479536 TEN1Q86WV5 123 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 GKN2Q86XP6 184 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 OR4C12Q96R67 309 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 C12orf57Q99622 126 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 SMR3AQ99954 134 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
NF1-209ENST00000479536 JPT1Q9UK76 154 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 TPRKBQ9Y3C4 175 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 KNTC1P50748 2209 aa1.21□□□□□ -2.22
NF1-209ENST00000479536 TANC2Q9HCD6 1990 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 LOC107984640A0A0U1RRK4 108 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 H3BMG7 143 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 J3KT08 172 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 DLEU1O43261 78 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 NUPR1O60356 82 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 DNAL4O96015 105 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 S100PP25815 95 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 DNAJB13P59910 316 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 RPS28P62857 69 aaKnown RBP1.2□□□□□ -2.22
NF1-209ENST00000479536 WHAMMP3Q1A5X7 153 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 VMA21Q3ZAQ7 101 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 SPRNQ5BIV9 151 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 GDF5OSQ5U4N7 250 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 TMEM229BQ8NBD8 167 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 CCL4L1Q8NHW4 92 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 LINC00526Q96FQ7 95 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 TPT1P8Q9HAU6 139 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 NIT2Q9NQR4 276 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 HERC2O95714 4834 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 DNAH1Q9P2D7 4330 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 CITO14578 2027 aa1.2□□□□□ -2.22
NF1-209ENST00000479536 ESPL1Q14674 2120 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 ABCA4P78363 2273 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 C5orf58C9J3I9 102 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 H3BRM9 83 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 SULT1C4O75897 302 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 IFNGP01579 166 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 COX4I1P13073 169 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 COX7CP15954 63 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 SDC4P31431 198 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 CKS1BP61024 79 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 MAXP61244 160 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 CNTRLQ7Z7A1 2325 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 FAM19A2Q8N3H0 131 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 OR10AG1Q8NH19 301 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 PSMF1Q92530 271 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 ODF3Q96PU9 254 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 VPS25Q9BRG1 176 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 SPANXA1Q9NS26 97 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 CBLN4Q9NTU7 201 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 COA4Q9NYJ1 87 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 TMEM14CQ9P0S9 112 aa1.19□□□□□ -2.22
NF1-209ENST00000479536 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
NF1-209ENST00000479536 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
NF1-209ENST00000479536 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 ZGRF1Q86YA3 2104 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 CACNA1CQ13936 2221 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 TRAV36DV7A0A075B6V5 113 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 SMIM6P0DI80 62 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 TPT1P13693 172 aaKnown RBP1.18□□□□□ -2.22
NF1-209ENST00000479536 CRYGSP22914 178 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 CD52P31358 61 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 FOXA3P55318 350 aaPredicted RBP1.18□□□□□ -2.22
NF1-209ENST00000479536 PSG9Q00887 426 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 DIAPH2-AS1Q14236 149 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 OR8B8Q15620 311 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 LINC00322Q6ZN03 302 aaPredicted RBP1.18□□□□□ -2.22
NF1-209ENST00000479536 LINC00269Q8N2A0 174 aa1.18□□□□□ -2.22
NF1-209ENST00000479536 MORN4Q8NDC4 146 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms