RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 G3V3Q6 166 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 PFDN1O60925 122 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 REG3GQ6UW15 175 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 SPINK6Q6UWN8 80 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 PGLYRP4Q96LB8 373 aa6.84□□□□□ -1.31
HDLBP-237ENST00000479169 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
HDLBP-237ENST00000479169 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
HDLBP-237ENST00000479169 COTL1Q14019 142 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 TMUB2Q71RG4 321 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 FAM213BQ8TBF2 198 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
HDLBP-237ENST00000479169 LINC00526Q96FQ7 95 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 NIT2Q9NQR4 276 aa6.83□□□□□ -1.32
HDLBP-237ENST00000479169 ARPC5O15511 151 aa6.82□□□□□ -1.32
HDLBP-237ENST00000479169 SRSF9Q13242 221 aaKnown RBP eCLIP6.82□□□□□ -1.32
HDLBP-237ENST00000479169 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
HDLBP-237ENST00000479169 CACNG7P62955 275 aa6.81□□□□□ -1.32
HDLBP-237ENST00000479169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-237ENST00000479169 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
HDLBP-237ENST00000479169 C19orf71A6NCJ1 209 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 TRGC1P0CF51 173 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 FOXI1Q12951 378 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 AMMECR1LQ6DCA0 310 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 LYZL1Q6UWQ5 148 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 Q6ZNX1 250 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 KCNRGQ8N5I3 272 aa6.8□□□□□ -1.32
HDLBP-237ENST00000479169 TRAV26-2A0A0B4J265 109 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 SMLR1H3BR10 107 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 NTF3P20783 257 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 RPS20P60866 119 aaKnown RBP6.79□□□□□ -1.32
HDLBP-237ENST00000479169 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
HDLBP-237ENST00000479169 Q6ZRP5 223 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 GATD1Q8NB37 220 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
HDLBP-237ENST00000479169 RAB19A4D1S5 217 aa6.78□□□□□ -1.32
HDLBP-237ENST00000479169 F2Z2F3 143 aa6.78□□□□□ -1.32
HDLBP-237ENST00000479169 XCL1P47992 114 aa6.78□□□□□ -1.32
HDLBP-237ENST00000479169 C11orf52Q96A22 123 aa6.78□□□□□ -1.32
HDLBP-237ENST00000479169 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
HDLBP-237ENST00000479169 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
HDLBP-237ENST00000479169 UMAD1C9J7I0 102 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 IFNA1P01562 189 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 H2AFB1P0C5Y9 115 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 FGF6P10767 208 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 CCL20P78556 96 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 GNG13Q9P2W3 67 aa6.77□□□□□ -1.33
HDLBP-237ENST00000479169 XKRY2A2RUG3 117 aa6.76□□□□□ -1.33
HDLBP-237ENST00000479169 CCL25O15444 150 aa6.76□□□□□ -1.33
HDLBP-237ENST00000479169 APCSP02743 223 aa6.76□□□□□ -1.33
HDLBP-237ENST00000479169 CTRLP40313 264 aa6.76□□□□□ -1.33
HDLBP-237ENST00000479169 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 GNG4P50150 75 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 TWIST1Q15672 202 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 OR5A1Q8NGJ0 315 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 MANBALQ9NQG1 85 aa6.75□□□□□ -1.33
HDLBP-237ENST00000479169 TRBV20OR9-2A0A075B6H5 130 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 NCR2O95944 276 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 FOXA3P55318 350 aaPredicted RBP6.74□□□□□ -1.33
HDLBP-237ENST00000479169 SYCNQ0VAF6 134 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 C9orf62Q8N4C0 152 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 PKIGQ9Y2B9 76 aa6.74□□□□□ -1.33
HDLBP-237ENST00000479169 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 H7C423 109 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 BCL2P10415 239 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 ZNF345Q14585 488 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 CNFNQ9BYD5 112 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
HDLBP-237ENST00000479169 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 ZNF25P17030 456 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-237ENST00000479169 CAMPP49913 170 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 PRR26Q8N8Z3 221 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 BTF3L4Q96K17 158 aa6.72□□□□□ -1.33
HDLBP-237ENST00000479169 IGLV4-69A0A075B6H9 119 aa6.71□□□□□ -1.34
HDLBP-237ENST00000479169 BCL2L11O43521 198 aa6.71□□□□□ -1.34
HDLBP-237ENST00000479169 MT-ND6P03923 174 aa6.71□□□□□ -1.34
HDLBP-237ENST00000479169 PMCHP20382 165 aa6.71□□□□□ -1.34
HDLBP-237ENST00000479169 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
HDLBP-237ENST00000479169 TMEM101Q96IK0 257 aa6.71□□□□□ -1.34
HDLBP-237ENST00000479169 RNASE7Q9H1E1 156 aaKnown RBP6.71□□□□□ -1.34
HDLBP-237ENST00000479169 MUC2Q02817 5179 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 KANTRA0A1W2PQU2 76 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 I3L3M4 83 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 TSHBP01222 138 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 ESDP10768 282 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 MEF2BQ02080 365 aaPredicted RBP6.7□□□□□ -1.34
HDLBP-237ENST00000479169 SS18Q15532 418 aa6.7□□□□□ -1.34
HDLBP-237ENST00000479169 C1orf137Q5JT78 98 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms