RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 JOSD1Q15040 202 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-211ENST00000476772 TOMM6Q96B49 74 aa20.24■□□□□ 0.83
VEGFA-211ENST00000476772 LINC00694P0DN24 101 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 COTL1Q14019 142 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 DAZ4Q86SG3 579 aaKnown RBP20.22■□□□□ 0.83
VEGFA-211ENST00000476772 B9D2Q9BPU9 175 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 DAZ3Q9NR90 486 aaKnown RBP20.22■□□□□ 0.83
VEGFA-211ENST00000476772 PAX4O43316 350 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 SMIM6P0DI80 62 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 GYPEP15421 78 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 MAP1LC3CQ9BXW4 147 aa20.22■□□□□ 0.83
VEGFA-211ENST00000476772 RPL39P62891 51 aaKnown RBP20.21■□□□□ 0.83
VEGFA-211ENST00000476772 IFI27L1Q96BM0 104 aa20.21■□□□□ 0.83
VEGFA-211ENST00000476772 VSIG2Q96IQ7 327 aa20.21■□□□□ 0.83
VEGFA-211ENST00000476772 CYSLTR1Q9Y271 337 aa20.21■□□□□ 0.83
VEGFA-211ENST00000476772 A0A0J9YY99 117 aa20.2■□□□□ 0.82
VEGFA-211ENST00000476772 SYS1-DBNDD2H3BUS1 97 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 SCGB1D1O95968 90 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 G0S2P27469 103 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 Q6ZTC4 211 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 DNAH9Q9NYC9 4486 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 SPATA12Q7Z6I5 190 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 Q8N976 141 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 C20orf203Q8NBC4 194 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 C11orf45Q8TAV5 145 aa20.19■□□□□ 0.82
VEGFA-211ENST00000476772 TRAV26-1A0A087WT03 109 aa20.18■□□□□ 0.82
VEGFA-211ENST00000476772 NANOS2P60321 138 aaKnown RBP20.18■□□□□ 0.82
VEGFA-211ENST00000476772 CHCHD7Q9BUK0 85 aa20.18■□□□□ 0.82
VEGFA-211ENST00000476772 H0Y8G0 127 aa20.17■□□□□ 0.82
VEGFA-211ENST00000476772 SCGB3A1Q96QR1 104 aa20.17■□□□□ 0.82
VEGFA-211ENST00000476772 ATP5LO75964 103 aa20.16■□□□□ 0.82
VEGFA-211ENST00000476772 CDPF1Q6NVV7 123 aa20.16■□□□□ 0.82
VEGFA-211ENST00000476772 LINC00518Q8N0U6 118 aa20.16■□□□□ 0.82
VEGFA-211ENST00000476772 NTM-AS1Q6ZSK4 140 aa20.16■□□□□ 0.82
VEGFA-211ENST00000476772 C12orf57Q99622 126 aa20.14■□□□□ 0.81
VEGFA-211ENST00000476772 LINC01549A6NIU2 74 aa20.13■□□□□ 0.81
VEGFA-211ENST00000476772 DEFA6Q01524 100 aa20.13■□□□□ 0.81
VEGFA-211ENST00000476772 ERASQ7Z444 233 aa20.13■□□□□ 0.81
VEGFA-211ENST00000476772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-211ENST00000476772 PET117Q6UWS5 81 aa20.13■□□□□ 0.81
VEGFA-211ENST00000476772 ATP6V0E2Q8NHE4 81 aa20.12■□□□□ 0.81
VEGFA-211ENST00000476772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-211ENST00000476772 IGKV2-29A2NJV5 120 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-211ENST00000476772 IGIPA6NJ69 53 aa20.11■□□□□ 0.81
VEGFA-211ENST00000476772 GTSF1LQ9H1H1 148 aa20.11■□□□□ 0.81
VEGFA-211ENST00000476772 A0A096LPF7 62 aa20.1■□□□□ 0.81
VEGFA-211ENST00000476772 PRSS1P07477 247 aa20.09■□□□□ 0.81
VEGFA-211ENST00000476772 TIMM17AQ99595 171 aa20.09■□□□□ 0.81
VEGFA-211ENST00000476772 Q6ZN92 141 aa20.08■□□□□ 0.81
VEGFA-211ENST00000476772 LINC01545Q5VT33 79 aa20.07■□□□□ 0.8
VEGFA-211ENST00000476772 PMCHL2Q9BQD1 86 aa20.07■□□□□ 0.8
VEGFA-211ENST00000476772 C20orf202A1L168 122 aa20.07■□□□□ 0.8
VEGFA-211ENST00000476772 BAALCQ8WXS3 180 aa20.07■□□□□ 0.8
VEGFA-211ENST00000476772 TMEM141Q96I45 108 aa20.07■□□□□ 0.8
VEGFA-211ENST00000476772 DEFB131BA0A096LNP1 70 aa20.06■□□□□ 0.8
VEGFA-211ENST00000476772 ICOSQ9Y6W8 199 aa20.06■□□□□ 0.8
VEGFA-211ENST00000476772 TRBV6-8A0A0A6YYG3 113 aa20.05■□□□□ 0.8
VEGFA-211ENST00000476772 TRBV25-1A0A075B6N4 114 aa20.04■□□□□ 0.8
VEGFA-211ENST00000476772 MRPL23Q16540 153 aaKnown RBP20.04■□□□□ 0.8
VEGFA-211ENST00000476772 TMEM97Q5BJF2 176 aa20.04■□□□□ 0.8
VEGFA-211ENST00000476772 LGALS9CQ6DKI2 356 aa20.04■□□□□ 0.8
VEGFA-211ENST00000476772 OPRPNQ99935 248 aaPredicted RBP20.04■□□□□ 0.8
VEGFA-211ENST00000476772 TMEM243Q9BU79 118 aa20.04■□□□□ 0.8
VEGFA-211ENST00000476772 UBE2D4Q9Y2X8 147 aa20.04■□□□□ 0.8
VEGFA-211ENST00000476772 CEMP1Q6PRD7 247 aaPredicted RBP20.03■□□□□ 0.8
VEGFA-211ENST00000476772 ATOH7Q8N100 152 aa20.03■□□□□ 0.8
VEGFA-211ENST00000476772 PYGO1Q9Y3Y4 419 aa20.03■□□□□ 0.8
VEGFA-211ENST00000476772 ODF1Q14990 250 aa20.02■□□□□ 0.8
VEGFA-211ENST00000476772 H3BNG1 76 aa20.01■□□□□ 0.79
VEGFA-211ENST00000476772 NHLRC4P0CG21 123 aaPredicted RBP20.01■□□□□ 0.79
VEGFA-211ENST00000476772 TEX43Q6ZNM6 134 aa20.01■□□□□ 0.79
VEGFA-211ENST00000476772 SPANXA1Q9NS26 97 aa20.01■□□□□ 0.79
VEGFA-211ENST00000476772 IGLV4-3A0A075B6K6 122 aa20■□□□□ 0.79
VEGFA-211ENST00000476772 ZC2HC1BQ5TFG8 222 aa20■□□□□ 0.79
VEGFA-211ENST00000476772 PRKDCP78527 4128 aaKnown RBP19.99■□□□□ 0.79
VEGFA-211ENST00000476772 TRAV10A0A0B4J240 114 aa19.99■□□□□ 0.79
VEGFA-211ENST00000476772 TRAV12-1A0A0B4J245 112 aa19.99■□□□□ 0.79
VEGFA-211ENST00000476772 FAM104AQ969W3 186 aa19.99■□□□□ 0.79
VEGFA-211ENST00000476772 A0A087WX48 190 aa19.98■□□□□ 0.79
VEGFA-211ENST00000476772 UBE2L6O14933 153 aa19.98■□□□□ 0.79
VEGFA-211ENST00000476772 FGF6P10767 208 aa19.97■□□□□ 0.79
VEGFA-211ENST00000476772 SH2D6Q7Z4S9 175 aa19.97■□□□□ 0.79
VEGFA-211ENST00000476772 TIMM21Q9BVV7 248 aa19.97■□□□□ 0.79
VEGFA-211ENST00000476772 PRSS29PA6NIE9 313 aa19.97■□□□□ 0.79
VEGFA-211ENST00000476772 PMVKQ15126 192 aa19.97■□□□□ 0.79
VEGFA-211ENST00000476772 COL7A1Q02388 2944 aa19.96■□□□□ 0.79
VEGFA-211ENST00000476772 CHCHD5Q9BSY4 110 aa19.96■□□□□ 0.79
VEGFA-211ENST00000476772 MRPL35Q9NZE8 188 aaKnown RBP19.96■□□□□ 0.79
VEGFA-211ENST00000476772 MEGF8Q7Z7M0 2845 aa19.96■□□□□ 0.79
VEGFA-211ENST00000476772 GAGE6Q13070 117 aa19.95■□□□□ 0.78
VEGFA-211ENST00000476772 Q6ZUT4 128 aa19.95■□□□□ 0.78
VEGFA-211ENST00000476772 MRPL52Q86TS9 123 aaKnown RBP19.95■□□□□ 0.78
VEGFA-211ENST00000476772 H7C423 109 aa19.94■□□□□ 0.78
VEGFA-211ENST00000476772 NPSP0C0P6 89 aa19.94■□□□□ 0.78
VEGFA-211ENST00000476772 S100A12P80511 92 aa19.94■□□□□ 0.78
VEGFA-211ENST00000476772 CST9LQ9H4G1 147 aa19.94■□□□□ 0.78
VEGFA-211ENST00000476772 CHTOPQ9Y3Y2 248 aaKnown RBP19.94■□□□□ 0.78
VEGFA-211ENST00000476772 RNASE13Q5GAN3 156 aaKnown RBP19.94■□□□□ 0.78
VEGFA-211ENST00000476772 PAPPA-AS1Q5QFB9 102 aa19.93■□□□□ 0.78
VEGFA-211ENST00000476772 DGAT2L7PQ6IED9 249 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms