RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRAV8-4A0A0B4J246 113 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 NDUFS6O75380 124 aaKnown RBP7.42□□□□□ -1.22
HDAC6-219ENST00000476625 P01737 135 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 CXCL1P09341 107 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 SMIM17P0DL12 118 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 SULT1A2P50226 295 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 BAGE2Q86Y30 109 aa7.42□□□□□ -1.22
HDAC6-219ENST00000476625 PFDN1O60925 122 aa7.41□□□□□ -1.22
HDAC6-219ENST00000476625 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
HDAC6-219ENST00000476625 hCG_2014768A0A024R1R8 64 aa7.4□□□□□ -1.22
HDAC6-219ENST00000476625 A0A1B0GUV1 79 aa7.4□□□□□ -1.22
HDAC6-219ENST00000476625 SMLR1H3BR10 107 aa7.4□□□□□ -1.22
HDAC6-219ENST00000476625 IGLC6P0CF74 106 aa7.4□□□□□ -1.22
HDAC6-219ENST00000476625 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
HDAC6-219ENST00000476625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-219ENST00000476625 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 IGKV2-29A2NJV5 120 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-219ENST00000476625 UMAD1C9J7I0 102 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 BCL2L11O43521 198 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 AMTP48728 403 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 TMUB2Q71RG4 321 aa7.39□□□□□ -1.23
HDAC6-219ENST00000476625 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-219ENST00000476625 UBE2L6O14933 153 aa7.38□□□□□ -1.23
HDAC6-219ENST00000476625 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
HDAC6-219ENST00000476625 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
HDAC6-219ENST00000476625 FAM213BQ8TBF2 198 aa7.38□□□□□ -1.23
HDAC6-219ENST00000476625 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
HDAC6-219ENST00000476625 H7C1H1 209 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 RPL35P42766 123 aaKnown RBP7.37□□□□□ -1.23
HDAC6-219ENST00000476625 FOXI1Q12951 378 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 REG3GQ6UW15 175 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 SLC51BQ86UW2 128 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 OR2D3Q8NGH3 330 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 SFT2D1Q8WV19 159 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 RPL39LQ96EH5 51 aaKnown RBP7.37□□□□□ -1.23
HDAC6-219ENST00000476625 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
HDAC6-219ENST00000476625 LYZL1Q6UWQ5 148 aa7.36□□□□□ -1.23
HDAC6-219ENST00000476625 PGLYRP4Q96LB8 373 aa7.36□□□□□ -1.23
HDAC6-219ENST00000476625 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
HDAC6-219ENST00000476625 RAB19A4D1S5 217 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 XCL1P47992 114 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-219ENST00000476625 CCL20P78556 96 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 COTL1Q14019 142 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 CENPWQ5EE01 88 aa7.35□□□□□ -1.23
HDAC6-219ENST00000476625 RNASEKQ6P5S7 137 aaKnown RBP7.35□□□□□ -1.23
HDAC6-219ENST00000476625 A0A1B0GVG6 124 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 A0A1W2PNN7 141 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 S100A9P06702 114 aaKnown RBP7.34□□□□□ -1.23
HDAC6-219ENST00000476625 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 MBD3L1Q8WWY6 194 aa7.34□□□□□ -1.23
HDAC6-219ENST00000476625 NTF3P20783 257 aa7.33□□□□□ -1.24
HDAC6-219ENST00000476625 GAGE2BQ13066 116 aa7.33□□□□□ -1.24
HDAC6-219ENST00000476625 AMMECR1LQ6DCA0 310 aa7.33□□□□□ -1.24
HDAC6-219ENST00000476625 Q6ZRP5 223 aa7.33□□□□□ -1.24
HDAC6-219ENST00000476625 CARD19Q96LW7 228 aa7.33□□□□□ -1.24
HDAC6-219ENST00000476625 CCL25O15444 150 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 FGF6P10767 208 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 CACNG7P62955 275 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 C4orf48Q5BLP8 95 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 C9orf62Q8N4C0 152 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 PRR26Q8N8Z3 221 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 KRTAP9-2Q9BYQ4 174 aa7.32□□□□□ -1.24
HDAC6-219ENST00000476625 TRBV20OR9-2A0A075B6H5 130 aa7.31□□□□□ -1.24
HDAC6-219ENST00000476625 BCL2P10415 239 aa7.31□□□□□ -1.24
HDAC6-219ENST00000476625 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
HDAC6-219ENST00000476625 PSORS1C2Q9UIG4 136 aa7.31□□□□□ -1.24
HDAC6-219ENST00000476625 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 H2AFB1P0C5Y9 115 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 TRGC1P0CF51 173 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
HDAC6-219ENST00000476625 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 C11orf52Q96A22 123 aa7.3□□□□□ -1.24
HDAC6-219ENST00000476625 MUC2Q02817 5179 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 TRAV1-1A0A0B4J248 108 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 FAM231BA6NCW3 169 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 APCSP02743 223 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 TAGLN2P37802 199 aaKnown RBP7.29□□□□□ -1.24
HDAC6-219ENST00000476625 CTRLP40313 264 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
HDAC6-219ENST00000476625 BLOC1S1P78537 153 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 SYCNQ0VAF6 134 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 TWIST1Q15672 202 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
HDAC6-219ENST00000476625 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
HDAC6-219ENST00000476625 IGHV1-58A0A0C4DH39 117 aa7.28□□□□□ -1.24
HDAC6-219ENST00000476625 IFNA1P01562 189 aa7.28□□□□□ -1.24
HDAC6-219ENST00000476625 GNG4P50150 75 aa7.27□□□□□ -1.25
HDAC6-219ENST00000476625 RNASE13Q5GAN3 156 aaKnown RBP7.27□□□□□ -1.25
HDAC6-219ENST00000476625 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
HDAC6-219ENST00000476625 NUDT10Q8NFP7 164 aa7.27□□□□□ -1.25
HDAC6-219ENST00000476625 NUDT11Q96G61 164 aa7.27□□□□□ -1.25
HDAC6-219ENST00000476625 RNASE7Q9H1E1 156 aaKnown RBP7.27□□□□□ -1.25
HDAC6-219ENST00000476625 TMEM242Q9NWH2 141 aa7.27□□□□□ -1.25
HDAC6-219ENST00000476625 SDHAF1A6NFY7 115 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms