RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SPATA25Q9BR10 227 aa9.7□□□□□ -0.86
TRAF4-210ENST00000475329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
TRAF4-210ENST00000475329 ATP5G1P05496 136 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 S100A12P80511 92 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 DAZ4Q86SG3 579 aaKnown RBP9.69□□□□□ -0.86
TRAF4-210ENST00000475329 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 DAZ3Q9NR90 486 aaKnown RBP9.69□□□□□ -0.86
TRAF4-210ENST00000475329 PRO0255Q9UI72 69 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
TRAF4-210ENST00000475329 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 CRYBA4P53673 196 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 ERASQ7Z444 233 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 NBEAL2Q6ZNJ1 2754 aa9.68□□□□□ -0.86
TRAF4-210ENST00000475329 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
TRAF4-210ENST00000475329 PRSS1P07477 247 aa9.67□□□□□ -0.86
TRAF4-210ENST00000475329 RPL39P62891 51 aaKnown RBP9.67□□□□□ -0.86
TRAF4-210ENST00000475329 LGALS9CQ6DKI2 356 aa9.67□□□□□ -0.86
TRAF4-210ENST00000475329 Q6ZN92 141 aa9.67□□□□□ -0.86
TRAF4-210ENST00000475329 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
TRAF4-210ENST00000475329 LINC00694P0DN24 101 aa9.66□□□□□ -0.86
TRAF4-210ENST00000475329 TMEM141Q96I45 108 aa9.66□□□□□ -0.86
TRAF4-210ENST00000475329 TIMM17AQ99595 171 aa9.66□□□□□ -0.86
TRAF4-210ENST00000475329 PAX4O43316 350 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 GYPEP15421 78 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 MRAPQ8TCY5 172 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 VAMP8Q9BV40 100 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
TRAF4-210ENST00000475329 A0A0J9YWU9 116 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 F5H768 121 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 HTN3P15516 51 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
TRAF4-210ENST00000475329 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
TRAF4-210ENST00000475329 ODF1Q14990 250 aa9.63□□□□□ -0.87
TRAF4-210ENST00000475329 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
TRAF4-210ENST00000475329 BAALCQ8WXS3 180 aa9.63□□□□□ -0.87
TRAF4-210ENST00000475329 GTSF1LQ9H1H1 148 aa9.63□□□□□ -0.87
TRAF4-210ENST00000475329 A0A087WX48 190 aa9.62□□□□□ -0.87
TRAF4-210ENST00000475329 SPANXA1Q9NS26 97 aa9.62□□□□□ -0.87
TRAF4-210ENST00000475329 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
TRAF4-210ENST00000475329 MGAM2Q2M2H8 2515 aa9.62□□□□□ -0.87
TRAF4-210ENST00000475329 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
TRAF4-210ENST00000475329 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 A0A0J9YY99 117 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
TRAF4-210ENST00000475329 NPSP0C0P6 89 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 SMAGPQ0VAQ4 97 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 NTM-AS1Q6ZSK4 140 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 ATP6V0E2Q8NHE4 81 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 PAM16Q9Y3D7 125 aa9.61□□□□□ -0.87
TRAF4-210ENST00000475329 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 DPM2O94777 84 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 PMVKQ15126 192 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 ZNF664Q8N3J9 261 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 C11orf45Q8TAV5 145 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 TIMM21Q9BVV7 248 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
TRAF4-210ENST00000475329 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
TRAF4-210ENST00000475329 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 F8VRH5 84 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 TSTD3H0UI37 97 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 UBE2L6O14933 153 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 PKIAP61925 76 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 SPATA45Q537H7 98 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 Q6ZTC4 211 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
TRAF4-210ENST00000475329 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
TRAF4-210ENST00000475329 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 H7C423 109 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 IGKCP01834 107 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 PLNP26678 52 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 MRPL23Q16540 153 aaKnown RBP9.58□□□□□ -0.88
TRAF4-210ENST00000475329 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 SH2D6Q7Z4S9 175 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 PRO1933Q9H354 126 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
TRAF4-210ENST00000475329 hDV102S1A0JD36 115 aa9.57□□□□□ -0.88
TRAF4-210ENST00000475329 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
TRAF4-210ENST00000475329 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
TRAF4-210ENST00000475329 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
TRAF4-210ENST00000475329 VCX2Q9H322 139 aa9.57□□□□□ -0.88
TRAF4-210ENST00000475329 PCP4L1A6NKN8 68 aa9.56□□□□□ -0.88
TRAF4-210ENST00000475329 H3BNG1 76 aa9.56□□□□□ -0.88
TRAF4-210ENST00000475329 FGF6P10767 208 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 586.1 ms