RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SSTP61278 116 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 BAGE2Q86Y30 109 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 LYPD6BQ8NI32 183 aa7.88□□□□□ -1.15
SKA3-206ENST00000475251 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
SKA3-206ENST00000475251 PFDN1O60925 122 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 NKX2-5P52952 324 aaPredicted RBP7.86□□□□□ -1.15
SKA3-206ENST00000475251 ODF1Q14990 250 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 SUMO4Q6EEV6 95 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 RASL11AQ6T310 242 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 Q6ZRP5 223 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 MLST8Q9BVC4 326 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 MED28Q9H204 178 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 ALG5Q9Y673 324 aa7.86□□□□□ -1.15
SKA3-206ENST00000475251 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
SKA3-206ENST00000475251 PAGE4O60829 102 aa7.85□□□□□ -1.15
SKA3-206ENST00000475251 AMTP48728 403 aa7.85□□□□□ -1.15
SKA3-206ENST00000475251 CACNG7P62955 275 aa7.85□□□□□ -1.15
SKA3-206ENST00000475251 COTL1Q14019 142 aa7.85□□□□□ -1.15
SKA3-206ENST00000475251 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
SKA3-206ENST00000475251 FXYD6-FXYD2A0A087WZ82 144 aa7.84□□□□□ -1.15
SKA3-206ENST00000475251 A0A096LNI7 61 aa7.84□□□□□ -1.15
SKA3-206ENST00000475251 GIPP09681 153 aaPredicted RBP7.84□□□□□ -1.15
SKA3-206ENST00000475251 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
SKA3-206ENST00000475251 TPPP3Q9BW30 176 aa7.84□□□□□ -1.15
SKA3-206ENST00000475251 NIT2Q9NQR4 276 aa7.84□□□□□ -1.15
SKA3-206ENST00000475251 IGKV3OR2-268A0A0C4DH90 116 aa7.83□□□□□ -1.16
SKA3-206ENST00000475251 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
SKA3-206ENST00000475251 TRGC1P0CF51 173 aa7.83□□□□□ -1.16
SKA3-206ENST00000475251 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
SKA3-206ENST00000475251 FER1L6-AS1Q8NA97 138 aa7.83□□□□□ -1.16
SKA3-206ENST00000475251 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
SKA3-206ENST00000475251 KRTAP4-12Q9BQ66 201 aa7.83□□□□□ -1.16
SKA3-206ENST00000475251 Q5BKY6 102 aa7.82□□□□□ -1.16
SKA3-206ENST00000475251 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
SKA3-206ENST00000475251 XKRY2A2RUG3 117 aa7.81□□□□□ -1.16
SKA3-206ENST00000475251 F2Z2F3 143 aa7.81□□□□□ -1.16
SKA3-206ENST00000475251 IGLC6P0CF74 106 aa7.81□□□□□ -1.16
SKA3-206ENST00000475251 TMUB2Q71RG4 321 aa7.81□□□□□ -1.16
SKA3-206ENST00000475251 H7C423 109 aa7.8□□□□□ -1.16
SKA3-206ENST00000475251 OR2D3Q8NGH3 330 aa7.8□□□□□ -1.16
SKA3-206ENST00000475251 SFT2D1Q8WV19 159 aa7.8□□□□□ -1.16
SKA3-206ENST00000475251 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
SKA3-206ENST00000475251 NCR2O95944 276 aa7.79□□□□□ -1.16
SKA3-206ENST00000475251 RPL35P42766 123 aaKnown RBP7.79□□□□□ -1.16
SKA3-206ENST00000475251 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
SKA3-206ENST00000475251 IGHV1-58A0A0C4DH39 117 aa7.78□□□□□ -1.16
SKA3-206ENST00000475251 UMAD1C9J7I0 102 aa7.78□□□□□ -1.16
SKA3-206ENST00000475251 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
SKA3-206ENST00000475251 RNASEKQ6P5S7 137 aaKnown RBP7.78□□□□□ -1.16
SKA3-206ENST00000475251 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
SKA3-206ENST00000475251 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 APCSP02743 223 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 NTF3P20783 257 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 FOXI1Q12951 378 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 KCNRGQ8N5I3 272 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 FAM213BQ8TBF2 198 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 SMIM12Q96EX1 92 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 CYTL1Q9NRR1 136 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 PSORS1C2Q9UIG4 136 aa7.77□□□□□ -1.17
SKA3-206ENST00000475251 A0A1B0GV50 99 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 ARPC5O15511 151 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 IFNA1P01562 189 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 XCL1P47992 114 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 SYCNQ0VAF6 134 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 OR5A1Q8NGJ0 315 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 BTF3L4Q96K17 158 aa7.76□□□□□ -1.17
SKA3-206ENST00000475251 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 FGF6P10767 208 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 LYZL1Q6UWQ5 148 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
SKA3-206ENST00000475251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
SKA3-206ENST00000475251 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
SKA3-206ENST00000475251 C19orf71A6NCJ1 209 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 MT-ND6P03923 174 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 SS18Q15532 418 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 TEX261Q6UWH6 196 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 Q6ZNX1 250 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 KRTAP19-1Q8IUB9 90 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 C11orf52Q96A22 123 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 MANBALQ9NQG1 85 aa7.74□□□□□ -1.17
SKA3-206ENST00000475251 CCL25O15444 150 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 GNG4P50150 75 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 EIF5AP63241 154 aaKnown RBP7.73□□□□□ -1.17
SKA3-206ENST00000475251 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 TWIST1Q15672 202 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 EIF5AL1Q6IS14 154 aaKnown RBP7.73□□□□□ -1.17
SKA3-206ENST00000475251 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 C9orf62Q8N4C0 152 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
SKA3-206ENST00000475251 LPAP08519 4548 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms