RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 REG3GQ6UW15 175 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 C8orf49Q96NF6 230 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 GNG13Q9P2W3 67 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 DOCK7Q96N67 2140 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 IGLV3-9A0A075B6K5 115 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 SLC25A20O43772 301 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 DPTQ07507 201 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 KLKP1Q107X0 134 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 CMC2Q9NRP2 79 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 ANKRD12Q6UB98 2062 aa4.32□□□□□ -1.72
SMARCE1-208ENST00000474246 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 FXYD2P54710 66 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 ZNF497Q6ZNH5 498 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 CHCHD1Q96BP2 118 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 DPM3Q9P2X0 92 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 H3BMM0 161 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 IGKV1-39P01597 117 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 IGKV1D-39P04432 117 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 RPL27AP46776 148 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 ODF3L2Q3SX64 289 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 ZNF627Q7L945 461 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 UBE2WQ96B02 151 aa4.31□□□□□ -1.72
SMARCE1-208ENST00000474246 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 XCL1P47992 114 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 MRPL51Q4U2R6 128 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 RP1P56715 2156 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 IGHV3-74A0A0B4J1X5 117 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 IGKV1-6A0A0C4DH72 117 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 C19orf71A6NCJ1 209 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 LINC00269Q8N2A0 174 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 FDCSPQ8NFU4 85 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 SMIM7Q9BQ49 75 aa4.3□□□□□ -1.72
SMARCE1-208ENST00000474246 NUMA1Q14980 2115 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 IGHV3-16A0A0C4DH30 117 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 NPPCP23582 126 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 DSCR9P59020 149 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 EGFEM1PQ0D2K5 195 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 DYNLRB2Q8TF09 96 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 TTTY13Q9BZ97 58 aa4.29□□□□□ -1.72
SMARCE1-208ENST00000474246 FAM72CH0Y354 149 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 FAM72DQ6L9T8 149 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 IFI27L1Q96BM0 104 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 TRPM6Q9BX84 2022 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 IGHV3OR16-10A0A075B7F0 116 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 A0A1B0GWA3 101 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 GNRH2O43555 120 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 TSPEAR-AS2P59090 65 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 PRR4Q16378 134 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 FAM53AQ6NSI3 398 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 ORMDL3Q8N138 153 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 CACNA1CQ13936 2221 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 NCOA6Q14686 2063 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
SMARCE1-208ENST00000474246 SEC16AO15027 2179 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV3-72A0A0B4J1Y9 119 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 IGKV3D-20A0A0C4DH25 116 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 Q6ZSN1 163 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 Q8N7P7 452 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 Q96M85 177 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 HERC1Q15751 4861 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 PLXNA2O75051 1894 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 NYNRINQ9P2P1 1898 aaKnown RBP4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV5-51A0A0C4DH38 117 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 LY6G5CQ5SRR4 150 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 CASC10Q5T4H9 136 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 ZCCHC23Q6ZST2 131 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 VMO1Q7Z5L0 202 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 RPRMLQ8N4K4 120 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 ZNF524Q96C55 264 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 FGF23Q9GZV9 251 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
SMARCE1-208ENST00000474246 IGLV3-12A0A075B6K2 115 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 IGHV4-4A0A075B6R2 117 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 A0A0B4J2C4 111 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 H3BVH4 76 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 LEPROTL1O95214 131 aa4.26□□□□□ -1.73
SMARCE1-208ENST00000474246 CAV3P56539 151 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms