RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 APOHP02749 345 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-205ENST00000472034 PRH1P02810 166 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
LMNB1-205ENST00000472034 SCGB1C2P0DMR2 95 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 IGHV1-8P0DP01 117 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 TMEM30BQ3MIR4 351 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 TMEM170BQ5T4T1 132 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 LYPD1Q8N2G4 141 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 ZNRF1Q8ND25 227 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 UPK3BQ9BT76 320 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 MAP6D1Q9H9H5 199 aa3.16□□□□□ -1.9
LMNB1-205ENST00000472034 PIGBOS1A0A0B4J2F0 54 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 UBE2L5PA0A1B0GUS4 154 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 A0A1B0GWA3 101 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.91
LMNB1-205ENST00000472034 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 J3QRE1 110 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 UPK2O00526 184 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 SYNGR2O43760 224 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 FCGR2CP31995 323 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 CAV3P56539 151 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 SMIM11AP58511 58 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 MTPNP58546 118 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 RPL30P62888 115 aaKnown RBP3.15□□□□□ -1.91
LMNB1-205ENST00000472034 UBE2L3P68036 154 aaKnown RBP3.15□□□□□ -1.91
LMNB1-205ENST00000472034 ECSCRQ19T08 205 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 C10orf128Q5T292 105 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 FAM27BQ5VT28 67 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 Q6ZR54 194 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 C9orf47Q6ZRZ4 202 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 PHF5AQ7RTV0 110 aaKnown RBP3.15□□□□□ -1.91
LMNB1-205ENST00000472034 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 C5orf38Q86SI9 138 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 SERP2Q8N6R1 65 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 TSKUQ8WUA8 353 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 FAM3DQ96BQ1 224 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 SMIM7Q9BQ49 75 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 PAXXQ9BUH6 204 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 PARP12Q9H0J9 701 aaKnown RBP3.15□□□□□ -1.91
LMNB1-205ENST00000472034 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 CALYQ9NYX4 217 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 IL36RNQ9UBH0 155 aa3.15□□□□□ -1.91
LMNB1-205ENST00000472034 IGHV4OR15-8A0A075B7B6 117 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 A0A087WW49 117 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 TRAV8-1A0A0A6YYK1 113 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 J3QT63 122 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 HMGN4O00479 90 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 SRSF10O75494 262 aaKnown RBP3.14□□□□□ -1.91
LMNB1-205ENST00000472034 TCL1BO95988 128 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 CD7P09564 240 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 AQP1P29972 269 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 FUSP35637 526 aaKnown RBP eCLIP3.14□□□□□ -1.91
LMNB1-205ENST00000472034 UBE2D3P61077 147 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 UBE2D2P62837 147 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 RPL38P63173 70 aaKnown RBP3.14□□□□□ -1.91
LMNB1-205ENST00000472034 HAMPP81172 84 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 SERF2P84101 59 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 RIGQ13278 110 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 ZNF678Q5SXM1 525 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 C5orf56Q8N8D9 126 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 MOB4Q9Y3A3 225 aa3.14□□□□□ -1.91
LMNB1-205ENST00000472034 IGKV1D-17A0A075B6S4 117 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 A0A087X002 238 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 TRAV2A0A0B4J234 112 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 TRBV27A0A0K0K1C4 114 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 PGPA6NDG6 321 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 UBE2L6O14933 153 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 NDUFC1O43677 76 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 ASAH2BP0C7U1 165 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
LMNB1-205ENST00000472034 CSN1S1P47710 185 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 LRRC37A5PQ49AS3 106 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 EBLN2Q6P2I7 272 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 LINC00643Q86TS7 51 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 ZNF491Q8N8L2 437 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 OR5C1Q8NGR4 320 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 FAM213BQ8TBF2 198 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 TMEM230Q96A57 120 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 SLC25A2Q9BXI2 301 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 IL36BQ9NZH7 164 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 CKLFQ9UBR5 152 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
LMNB1-205ENST00000472034 IGKV2D-30A0A075B6S6 120 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 IGHV3OR16-9A0A0B4J2B5 98 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 C17orf98A8MV24 154 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 TCRAP04437 139 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 PRSS2P07478 247 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 RSPO1Q2MKA7 263 aaPredicted RBP3.12□□□□□ -1.91
LMNB1-205ENST00000472034 DEFB135Q30KP9 77 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 LELP1Q5T871 98 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 C1orf134Q5TEV5 83 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 MINOS1Q5TGZ0 78 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 FOXL2NBQ6ZUU3 175 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 PDPNQ86YL7 162 aa3.12□□□□□ -1.91
LMNB1-205ENST00000472034 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms