RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 UBE2L6O14933 153 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 MLST8Q9BVC4 326 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 MAP1LC3BQ9GZQ8 125 aa7.91□□□□□ -1.14
TRAPPC12-216ENST00000469400 BORCS7-ASMTA0A0B4J1R7 106 aa7.9□□□□□ -1.14
TRAPPC12-216ENST00000469400 Q5BKY6 102 aa7.9□□□□□ -1.14
TRAPPC12-216ENST00000469400 BAGE2Q86Y30 109 aa7.9□□□□□ -1.14
TRAPPC12-216ENST00000469400 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC12-216ENST00000469400 PGLYRP4Q96LB8 373 aa7.9□□□□□ -1.14
TRAPPC12-216ENST00000469400 HMSDA8MTL9 139 aa7.89□□□□□ -1.15
TRAPPC12-216ENST00000469400 PAGE4O60829 102 aa7.89□□□□□ -1.15
TRAPPC12-216ENST00000469400 S100A9P06702 114 aaKnown RBP7.89□□□□□ -1.15
TRAPPC12-216ENST00000469400 AMTP48728 403 aa7.89□□□□□ -1.15
TRAPPC12-216ENST00000469400 RASL11AQ6T310 242 aa7.89□□□□□ -1.15
TRAPPC12-216ENST00000469400 FAM231BA6NCW3 169 aa7.88□□□□□ -1.15
TRAPPC12-216ENST00000469400 TPPP3Q9BW30 176 aa7.88□□□□□ -1.15
TRAPPC12-216ENST00000469400 SCO2A0A1W2PP80 73 aa7.87□□□□□ -1.15
TRAPPC12-216ENST00000469400 SMLR1H3BR10 107 aa7.87□□□□□ -1.15
TRAPPC12-216ENST00000469400 COTL1Q14019 142 aa7.87□□□□□ -1.15
TRAPPC12-216ENST00000469400 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
TRAPPC12-216ENST00000469400 NIT2Q9NQR4 276 aa7.87□□□□□ -1.15
TRAPPC12-216ENST00000469400 FOXI1Q12951 378 aa7.86□□□□□ -1.15
TRAPPC12-216ENST00000469400 ZNF345Q14585 488 aa7.86□□□□□ -1.15
TRAPPC12-216ENST00000469400 LINC00526Q96FQ7 95 aa7.86□□□□□ -1.15
TRAPPC12-216ENST00000469400 PKIGQ9Y2B9 76 aa7.86□□□□□ -1.15
TRAPPC12-216ENST00000469400 IGLC6P0CF74 106 aa7.85□□□□□ -1.15
TRAPPC12-216ENST00000469400 ZNF664Q8N3J9 261 aa7.85□□□□□ -1.15
TRAPPC12-216ENST00000469400 FER1L6-AS1Q8NA97 138 aa7.85□□□□□ -1.15
TRAPPC12-216ENST00000469400 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
TRAPPC12-216ENST00000469400 FXYD6-FXYD2A0A087WZ82 144 aa7.84□□□□□ -1.15
TRAPPC12-216ENST00000469400 ARPC5O15511 151 aa7.84□□□□□ -1.15
TRAPPC12-216ENST00000469400 CACNG7P62955 275 aa7.84□□□□□ -1.15
TRAPPC12-216ENST00000469400 AMMECR1LQ6DCA0 310 aa7.84□□□□□ -1.15
TRAPPC12-216ENST00000469400 TMUB2Q71RG4 321 aa7.84□□□□□ -1.15
TRAPPC12-216ENST00000469400 XCL1P47992 114 aa7.83□□□□□ -1.16
TRAPPC12-216ENST00000469400 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
TRAPPC12-216ENST00000469400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 IGHV1-58A0A0C4DH39 117 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 A0A1W2PNN7 141 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 IGKV2-29A2NJV5 120 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 NTF3P20783 257 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 KCNRGQ8N5I3 272 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 PRR26Q8N8Z3 221 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 OR2D3Q8NGH3 330 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 CYTL1Q9NRR1 136 aa7.82□□□□□ -1.16
TRAPPC12-216ENST00000469400 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 A0A1B0GV50 99 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 F2Z2F3 143 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 FGF6P10767 208 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 RPL35P42766 123 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 RPS20P60866 119 aaKnown RBP7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 SYCNQ0VAF6 134 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 GAGE2BQ13066 116 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 SFT2D1Q8WV19 159 aa7.81□□□□□ -1.16
TRAPPC12-216ENST00000469400 A0A0U1RQV1 116 aa7.8□□□□□ -1.16
TRAPPC12-216ENST00000469400 H7C423 109 aa7.8□□□□□ -1.16
TRAPPC12-216ENST00000469400 MT-ND6P03923 174 aa7.8□□□□□ -1.16
TRAPPC12-216ENST00000469400 OR5A1Q8NGJ0 315 aa7.8□□□□□ -1.16
TRAPPC12-216ENST00000469400 MBD3L1Q8WWY6 194 aa7.8□□□□□ -1.16
TRAPPC12-216ENST00000469400 LINC00959A0A1B0GUT2 108 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 C19orf71A6NCJ1 209 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 ZNF561-AS1K7EIQ3 104 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 CCL25O15444 150 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 BCL2L11O43521 198 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 NCR2O95944 276 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 LYZL1Q6UWQ5 148 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
TRAPPC12-216ENST00000469400 LOC107984640A0A0U1RRK4 108 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 APCSP02743 223 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 CAMPP49913 170 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 C9orf116Q5BN46 136 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 SLC51BQ86UW2 128 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 FAM213BQ8TBF2 198 aa7.78□□□□□ -1.16
TRAPPC12-216ENST00000469400 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 IFNA1P01562 189 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 BCL2P10415 239 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 ZNF25P17030 456 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 EIF5AP63241 154 aaKnown RBP7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 IFITM2Q01629 132 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 RPL39LQ96EH5 51 aaKnown RBP7.77□□□□□ -1.17
TRAPPC12-216ENST00000469400 TWIST1Q15672 202 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 PRR4Q16378 134 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 TEX261Q6UWH6 196 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 CD164L2Q6UWJ8 174 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 DIRC1Q969H9 104 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 TMEM101Q96IK0 257 aa7.76□□□□□ -1.17
TRAPPC12-216ENST00000469400 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
TRAPPC12-216ENST00000469400 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
TRAPPC12-216ENST00000469400 SS18Q15532 418 aa7.75□□□□□ -1.17
TRAPPC12-216ENST00000469400 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms