RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 PRR9Q5T870 116 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 FOXI2Q6ZQN5 318 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 ZCCHC23Q6ZST2 131 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 ZGRF1Q86YA3 2104 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 CYTL1Q9NRR1 136 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 TMEM242Q9NWH2 141 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 MDC1Q14676 2089 aaKnown RBP2.49□□□□□ -2.01
SCFD1-205ENST00000469043 COL4A2P08572 1712 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 A0A0G2JQZ4 141 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 LOC285095A0A1B0GVY8 99 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 A0A1W2PNN7 141 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 H3BQF6 201 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 CCL16O15467 120 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 SNCGO76070 127 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 NDUFB6O95139 128 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 IGKV3-11P04433 115 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 ELOBQ15370 118 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 IGFBP7Q16270 282 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
SCFD1-205ENST00000469043 PIRTP0C851 137 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 PIPP12273 146 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-205ENST00000469043 BRS3P32247 399 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 NPC2P61916 151 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 ZNF833PQ6ZTB9 187 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 FP248Q71RG6 208 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-205ENST00000469043 C10orf105Q8TEF2 133 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 Q9H521 79 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 SDK1Q7Z5N4 2213 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 C5orf42Q9H799 3197 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 FN1P02751 2386 aaKnown RBP2.47□□□□□ -2.01
SCFD1-205ENST00000469043 ESPL1Q14674 2120 aa2.47□□□□□ -2.01
SCFD1-205ENST00000469043 ZDBF2Q9HCK1 2354 aa2.46□□□□□ -2.01
SCFD1-205ENST00000469043 ALPK2Q86TB3 2170 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 TNRC18O15417 2968 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-205ENST00000469043 GYPBP06028 91 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 PDE6HQ13956 83 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 ZNF431Q8TF32 576 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-205ENST00000469043 AQP10Q96PS8 301 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 PRO3102Q9H379 93 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 KNTC1P50748 2209 aa2.46□□□□□ -2.02
SCFD1-205ENST00000469043 ASCC3Q8N3C0 2202 aaKnown RBP2.46□□□□□ -2.02
SCFD1-205ENST00000469043 DOCK10Q96BY6 2186 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 IGKV2-24A0A0C4DH68 120 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 FAM24AA6NFZ4 105 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 GNGT1P63211 74 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 SPANXN1Q5VSR9 72 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 C12orf73Q69YU5 71 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 C4orf33Q8N1A6 199 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 LYPD1Q8N2G4 141 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 REV3LO60673 3130 aa2.45□□□□□ -2.02
SCFD1-205ENST00000469043 SPTBP11277 2137 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 TRAV2A0A0B4J234 112 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 TRAV17A0A0B4J275 112 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 TCRBV3S1A0A5B6 114 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 SDHAF1A6NFY7 115 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 Q1T7F1 81 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 C1orf137Q5JT78 98 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 KRTAP26-1Q6PEX3 210 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 IGFL1Q6UW32 110 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 DSCR8Q96T75 97 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 NDUFA12Q9UI09 145 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 V9GYS6 101 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 TTC28Q96AY4 2481 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 ASXL3Q9C0F0 2248 aa2.44□□□□□ -2.02
SCFD1-205ENST00000469043 SZT2Q5T011 3432 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 TECTAO75443 2155 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 BPTFQ12830 3046 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 CACNA1HO95180 2353 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 TNRC6BQ9UPQ9 1833 aaKnown RBP2.43□□□□□ -2.02
SCFD1-205ENST00000469043 TMEM262E9PQX1 116 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 PRB4P10163 310 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-205ENST00000469043 SPINT3P49223 89 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 S100A7L2Q5SY68 101 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 Q8N8P6 123 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 TVP23CQ96ET8 276 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 FAIMQ9NVQ4 179 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 PRUNE2Q8WUY3 3088 aa2.43□□□□□ -2.02
SCFD1-205ENST00000469043 SPTBN5Q9NRC6 3674 aaKnown RBP2.43□□□□□ -2.02
SCFD1-205ENST00000469043 CR1P17927 2039 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 POLR2JP52435 117 aaKnown RBP2.42□□□□□ -2.02
SCFD1-205ENST00000469043 UBA52P62987 128 aaKnown RBP2.42□□□□□ -2.02
SCFD1-205ENST00000469043 INSL4Q14641 139 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 C9orf62Q8N4C0 152 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 C4orf3Q8WVX3 66 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 C10orf82Q8WW14 230 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 TMEM141Q96I45 108 aa2.42□□□□□ -2.02
SCFD1-205ENST00000469043 TRIOO75962 3097 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 A0A0G2JND7 137 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 LOC730098B7Z3J9 87 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 F8W1H4 67 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 CCL22O00626 93 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 IGLV3-19P01714 112 aa2.41□□□□□ -2.02
SCFD1-205ENST00000469043 CNBPP62633 177 aaKnown RBP2.41□□□□□ -2.02
SCFD1-205ENST00000469043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-205ENST00000469043 OR10AG1Q8NH19 301 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms