RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 IFITM1P13164 125 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 TMEM256Q8N2U0 113 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 IGHV1OR15-1A0A075B7D0 117 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 TWIST1Q15672 202 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 AMN1Q8IY45 258 aa6□□□□□ -1.45
BRCA1-208ENST00000468300 ASIPP42127 132 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 Q0VG73 95 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 GAGE2BQ13066 116 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 GAGE2EQ4V326 116 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 FAM104BQ5XKR9 115 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 C11orf72Q8NBR9 251 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 TMEM191AQ9H0A3 160 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 GAGE2DQ9UEU5 116 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 SPCS1Q9Y6A9 102 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 VCYO14598 125 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 CMC4P56277 68 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-208ENST00000468300 C18orf32Q8TCD1 76 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 KIF25-AS1Q9Y6Z4 181 aa5.99□□□□□ -1.45
BRCA1-208ENST00000468300 LINC00315P59091 139 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 KRTAP10-11P60412 298 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 PMVKQ15126 192 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 XCL2Q9UBD3 114 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
BRCA1-208ENST00000468300 MRPL51Q4U2R6 128 aaKnown RBP5.98□□□□□ -1.45
BRCA1-208ENST00000468300 C10orf126Q8N4M7 172 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 KCNS1Q96KK3 526 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 Q9UF83 564 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 H3BUT2 72 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 POM121L12Q8N7R1 296 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 TMEM158Q8WZ71 300 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 RASL10AQ92737 203 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 C20orf78Q9BR46 151 aa5.98□□□□□ -1.45
BRCA1-208ENST00000468300 FGF6P10767 208 aa5.97□□□□□ -1.45
BRCA1-208ENST00000468300 CACNG7P62955 275 aa5.97□□□□□ -1.45
BRCA1-208ENST00000468300 MRPL55Q7Z7F7 128 aaKnown RBP5.97□□□□□ -1.45
BRCA1-208ENST00000468300 MDFIQ99750 246 aa5.97□□□□□ -1.45
BRCA1-208ENST00000468300 TIMM8BQ9Y5J9 83 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-208ENST00000468300 PLAC8L1A1L4L8 177 aa5.97□□□□□ -1.45
BRCA1-208ENST00000468300 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
BRCA1-208ENST00000468300 A6NDN8 102 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 SMKR1H3BMG3 65 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 INSP01308 110 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 KRTDAPP60985 99 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 EGFEM1PQ0D2K5 195 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 COL6A5A8TX70 2615 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 NACAE9PAV3 2078 aa5.96□□□□□ -1.45
BRCA1-208ENST00000468300 D6R8Y8 96 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 M0R381 172 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 SERF1AO75920 110 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 HERVK_113P63121 156 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 BORCS7Q96B45 105 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 GATA1P15976 413 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-208ENST00000468300 SPANXN1Q5VSR9 72 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 C18orf15Q96N68 181 aa5.96□□□□□ -1.46
BRCA1-208ENST00000468300 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 S100A4P26447 101 aaKnown RBP5.95□□□□□ -1.46
BRCA1-208ENST00000468300 ETDBQ3ZM63 59 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 NRACQ8N912 160 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 SAMD10Q9BYL1 202 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 PHLDA3Q9Y5J5 127 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 NCR2O95944 276 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 GCSHP23434 173 aa5.95□□□□□ -1.46
BRCA1-208ENST00000468300 NPYP01303 97 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 C9orf153Q5TBE3 101 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 GTSCR1Q86UQ5 136 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 C14orf178Q8N769 122 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-208ENST00000468300 LINC01587Q99440 93 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 KIR2DL4Q99706 377 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 HTN1P15515 57 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 MORN3Q6PF18 240 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-208ENST00000468300 ST20Q9HBF5 79 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 CD164L2Q6UWJ8 174 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 Q6ZWC4 215 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
BRCA1-208ENST00000468300 IGLV2-18A0A075B6J9 118 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 SH2D6Q7Z4S9 175 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 LINC01546A6NGU7 62 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 FABP2P12104 132 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 ORMDL3Q8N138 153 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 PRELID3AQ96N28 172 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 DPH3P1Q9H4G8 78 aa5.93□□□□□ -1.46
BRCA1-208ENST00000468300 PFN2P35080 140 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 X6R8D5 127 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 NOTCH3Q9UM47 2321 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 IGHV3OR16-12A0A075B7B8 117 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 A0A096LNJ9 63 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 IGHV4-30-4P0DP06 118 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 IFI27P40305 119 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-208ENST00000468300 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 SAMD5Q5TGI4 173 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 Q5XG85 94 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 BAGE3Q86Y29 109 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 NBEAL2Q6ZNJ1 2754 aa5.92□□□□□ -1.46
BRCA1-208ENST00000468300 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms