RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
COL1A2-204ENST00000467931 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
COL1A2-204ENST00000467931 IFNA1P01562 189 aa12.05□□□□□ -0.48
COL1A2-204ENST00000467931 MT1HL1P0DM35 61 aa12.05□□□□□ -0.48
COL1A2-204ENST00000467931 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
COL1A2-204ENST00000467931 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
COL1A2-204ENST00000467931 C19orf71A6NCJ1 209 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 HMSDA8MTL9 139 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 F2Z2F3 143 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 SLPIP03973 132 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 LYZL1Q6UWQ5 148 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 SPACA4Q8TDM5 124 aa12.04□□□□□ -0.48
COL1A2-204ENST00000467931 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
COL1A2-204ENST00000467931 C7orf33Q8WU49 177 aa12.03□□□□□ -0.48
COL1A2-204ENST00000467931 TEX46H3BTG2 121 aa12.02□□□□□ -0.49
COL1A2-204ENST00000467931 NTF3P20783 257 aa12.02□□□□□ -0.49
COL1A2-204ENST00000467931 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
COL1A2-204ENST00000467931 PHOX2AO14813 284 aa12.01□□□□□ -0.49
COL1A2-204ENST00000467931 HIGD2BQ4VC39 106 aa12.01□□□□□ -0.49
COL1A2-204ENST00000467931 C15orf56Q8N910 161 aa12.01□□□□□ -0.49
COL1A2-204ENST00000467931 SMIM12Q96EX1 92 aa12.01□□□□□ -0.49
COL1A2-204ENST00000467931 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
COL1A2-204ENST00000467931 MEF2BQ02080 365 aaPredicted RBP12□□□□□ -0.49
COL1A2-204ENST00000467931 COX6A2Q02221 97 aa12□□□□□ -0.49
COL1A2-204ENST00000467931 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
COL1A2-204ENST00000467931 MED9Q9NWA0 146 aa12□□□□□ -0.49
COL1A2-204ENST00000467931 IGKV2-24A0A0C4DH68 120 aa11.99□□□□□ -0.49
COL1A2-204ENST00000467931 PDE6DO43924 150 aa11.99□□□□□ -0.49
COL1A2-204ENST00000467931 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
COL1A2-204ENST00000467931 TWIST1Q15672 202 aa11.99□□□□□ -0.49
COL1A2-204ENST00000467931 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
COL1A2-204ENST00000467931 PLAC8Q9NZF1 115 aa11.99□□□□□ -0.49
COL1A2-204ENST00000467931 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
COL1A2-204ENST00000467931 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
COL1A2-204ENST00000467931 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
COL1A2-204ENST00000467931 GTSF1Q8WW33 167 aa11.98□□□□□ -0.49
COL1A2-204ENST00000467931 TRBV20OR9-2A0A075B6H5 130 aa11.97□□□□□ -0.49
COL1A2-204ENST00000467931 NDUFS6O75380 124 aaKnown RBP11.97□□□□□ -0.49
COL1A2-204ENST00000467931 CTRLP40313 264 aa11.97□□□□□ -0.49
COL1A2-204ENST00000467931 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
COL1A2-204ENST00000467931 EIF5AL1Q6IS14 154 aaKnown RBP11.96□□□□□ -0.49
COL1A2-204ENST00000467931 C9orf62Q8N4C0 152 aa11.96□□□□□ -0.49
COL1A2-204ENST00000467931 GATD1Q8NB37 220 aa11.96□□□□□ -0.49
COL1A2-204ENST00000467931 NUDT10Q8NFP7 164 aa11.96□□□□□ -0.49
COL1A2-204ENST00000467931 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
COL1A2-204ENST00000467931 NUDT11Q96G61 164 aa11.96□□□□□ -0.49
COL1A2-204ENST00000467931 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.95□□□□□ -0.5
COL1A2-204ENST00000467931 IGKV2-29A2NJV5 120 aaPredicted RBP11.95□□□□□ -0.5
COL1A2-204ENST00000467931 APCSP02743 223 aa11.95□□□□□ -0.5
COL1A2-204ENST00000467931 Q6ZNX1 250 aa11.95□□□□□ -0.5
COL1A2-204ENST00000467931 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
COL1A2-204ENST00000467931 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
COL1A2-204ENST00000467931 BCL2P10415 239 aa11.94□□□□□ -0.5
COL1A2-204ENST00000467931 SMIM15Q7Z3B0 74 aa11.94□□□□□ -0.5
COL1A2-204ENST00000467931 STPG4Q8N801 248 aa11.94□□□□□ -0.5
COL1A2-204ENST00000467931 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
COL1A2-204ENST00000467931 RNASE7Q9H1E1 156 aaKnown RBP11.93□□□□□ -0.5
COL1A2-204ENST00000467931 NCR2O95944 276 aa11.92□□□□□ -0.5
COL1A2-204ENST00000467931 PRR3P79522 188 aaKnown RBP11.92□□□□□ -0.5
COL1A2-204ENST00000467931 GVQW2A0A096LPI5 108 aaPredicted RBP11.91□□□□□ -0.5
COL1A2-204ENST00000467931 FGF6P10767 208 aa11.91□□□□□ -0.5
COL1A2-204ENST00000467931 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
COL1A2-204ENST00000467931 A0A096LNI7 61 aa11.9□□□□□ -0.5
COL1A2-204ENST00000467931 H7C423 109 aa11.9□□□□□ -0.5
COL1A2-204ENST00000467931 XCL1P47992 114 aa11.9□□□□□ -0.5
COL1A2-204ENST00000467931 BTF3L4Q96K17 158 aa11.9□□□□□ -0.5
COL1A2-204ENST00000467931 TNXBP22105 4242 aa11.9□□□□□ -0.5
COL1A2-204ENST00000467931 LRP2P98164 4655 aa11.89□□□□□ -0.51
COL1A2-204ENST00000467931 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
COL1A2-204ENST00000467931 TMEM101Q96IK0 257 aa11.89□□□□□ -0.51
COL1A2-204ENST00000467931 K7EN84 100 aa11.88□□□□□ -0.51
COL1A2-204ENST00000467931 PMCHP20382 165 aa11.88□□□□□ -0.51
COL1A2-204ENST00000467931 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
COL1A2-204ENST00000467931 FOXI1Q12951 378 aa11.88□□□□□ -0.51
COL1A2-204ENST00000467931 TEX261Q6UWH6 196 aa11.88□□□□□ -0.51
COL1A2-204ENST00000467931 OR5A1Q8NGJ0 315 aa11.88□□□□□ -0.51
COL1A2-204ENST00000467931 ZNF25P17030 456 aaPredicted RBP11.87□□□□□ -0.51
COL1A2-204ENST00000467931 OCC1Q8TAD7 63 aa11.87□□□□□ -0.51
COL1A2-204ENST00000467931 LINC00526Q96FQ7 95 aa11.87□□□□□ -0.51
COL1A2-204ENST00000467931 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
COL1A2-204ENST00000467931 PKIGQ9Y2B9 76 aa11.87□□□□□ -0.51
COL1A2-204ENST00000467931 CCL25O15444 150 aa11.86□□□□□ -0.51
COL1A2-204ENST00000467931 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
COL1A2-204ENST00000467931 CARD19Q96LW7 228 aa11.86□□□□□ -0.51
COL1A2-204ENST00000467931 LINC00474Q9P2X8 69 aa11.86□□□□□ -0.51
COL1A2-204ENST00000467931 IGHV1-58A0A0C4DH39 117 aa11.85□□□□□ -0.51
COL1A2-204ENST00000467931 I3L3M4 83 aa11.85□□□□□ -0.51
COL1A2-204ENST00000467931 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
COL1A2-204ENST00000467931 ODF1Q14990 250 aa11.85□□□□□ -0.51
COL1A2-204ENST00000467931 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
COL1A2-204ENST00000467931 ZNF561-AS1K7EIQ3 104 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 SS18Q15532 418 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 BORCS7Q96B45 105 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 MRAP2Q96G30 205 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 TMEM242Q9NWH2 141 aa11.83□□□□□ -0.52
COL1A2-204ENST00000467931 A8MWL6 223 aa11.82□□□□□ -0.52
COL1A2-204ENST00000467931 SLC51BQ86UW2 128 aa11.82□□□□□ -0.52
COL1A2-204ENST00000467931 ST20Q9HBF5 79 aa11.82□□□□□ -0.52
COL1A2-204ENST00000467931 FAM231BA6NCW3 169 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms