RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 FAM104AQ969W3 186 aa13.58□□□□□ -0.24
TSPAN4-210ENST00000464987 HERVK_113P61574 105 aa13.58□□□□□ -0.24
TSPAN4-210ENST00000464987 A8MWV9 139 aa13.57□□□□□ -0.24
TSPAN4-210ENST00000464987 FHL3Q13643 280 aa13.57□□□□□ -0.24
TSPAN4-210ENST00000464987 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-210ENST00000464987 EDA2RQ9HAV5 297 aa13.57□□□□□ -0.24
TSPAN4-210ENST00000464987 A0A1B0GV72 72 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 CCL24O00175 119 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 ZNF479Q96JC4 524 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 IGHV3-64A0A075B6Q5 118 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 A0A0J9YY99 117 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 NFE4Q86UQ8 179 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 JMJD1CQ15652 2540 aa13.56□□□□□ -0.24
TSPAN4-210ENST00000464987 SETXQ7Z333 2677 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 IGHV3OR16-12A0A075B7B8 117 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 INSP01308 110 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 SRSF9Q13242 221 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 RNASE13Q5GAN3 156 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 AMELXQ99217 191 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 TNFRSF18Q9Y5U5 241 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
TSPAN4-210ENST00000464987 IGHV3-38A0A0C4DH36 116 aa13.54□□□□□ -0.24
TSPAN4-210ENST00000464987 ZNF22P17026 224 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-210ENST00000464987 TMEM223A0PJW6 202 aa13.53□□□□□ -0.24
TSPAN4-210ENST00000464987 J3QQQ9 107 aa13.53□□□□□ -0.24
TSPAN4-210ENST00000464987 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
TSPAN4-210ENST00000464987 VCX2Q9H322 139 aa13.53□□□□□ -0.24
TSPAN4-210ENST00000464987 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
TSPAN4-210ENST00000464987 STHQ8IWL8 128 aa13.52□□□□□ -0.24
TSPAN4-210ENST00000464987 LINC01006Q8NI28 216 aa13.52□□□□□ -0.24
TSPAN4-210ENST00000464987 RRN3P1Q2M238 152 aa13.52□□□□□ -0.25
TSPAN4-210ENST00000464987 SIGMAR1Q99720 223 aa13.52□□□□□ -0.25
TSPAN4-210ENST00000464987 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.25
TSPAN4-210ENST00000464987 RHODO00212 210 aa13.51□□□□□ -0.25
TSPAN4-210ENST00000464987 LINC00467Q9BRT7 94 aa13.51□□□□□ -0.25
TSPAN4-210ENST00000464987 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-210ENST00000464987 IGKV2-29A2NJV5 120 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-210ENST00000464987 BEAN1Q3B7T3 259 aa13.5□□□□□ -0.25
TSPAN4-210ENST00000464987 PIK3CD-AS1Q5SR53 167 aa13.5□□□□□ -0.25
TSPAN4-210ENST00000464987 H3BMG7 143 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 UBE2D1P51668 147 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 PTH2Q96A98 100 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 PGPEP1Q9NXJ5 209 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 IGHV3-53P01767 116 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 SPXQ9BT56 116 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 WFDC10AQ9H1F0 79 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 PYGO1Q9Y3Y4 419 aa13.49□□□□□ -0.25
TSPAN4-210ENST00000464987 RS1O15537 224 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 APOMO95445 188 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 MTURNQ8N3F0 131 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 SLC25A29Q8N8R3 303 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 HECTD1Q9ULT8 2610 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 LEPROTO15243 131 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 IGHV3-30P01768 117 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 IGHV3-30-5P0DP03 117 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 SFTA2Q6UW10 78 aa13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 FLNBO75369 2602 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-210ENST00000464987 UBE2D4Q9Y2X8 147 aa13.47□□□□□ -0.25
TSPAN4-210ENST00000464987 TSSC4Q9Y5U2 329 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-210ENST00000464987 GTSF1LQ9H1H1 148 aa13.47□□□□□ -0.25
TSPAN4-210ENST00000464987 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
TSPAN4-210ENST00000464987 TRGV1A0A0A0MS02 117 aa13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 TRAV8-3A0A0A6YYJ7 113 aa13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 A6NJY4 79 aa13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 IL17DQ8TAD2 202 aa13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 RNASE1P07998 156 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 MRPS36P82909 103 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
TSPAN4-210ENST00000464987 ADARB2-AS1A8MUL3 147 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 TSPAN13O95857 204 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 WFDC2Q14508 124 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 Q6ZUT4 128 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 Q6ZTI0 123 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 C10orf126Q8N4M7 172 aa13.44□□□□□ -0.26
TSPAN4-210ENST00000464987 TEX48A0A1B0GUV7 120 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 GIG44P09565 113 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 CFC1BP0CG36 223 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 CFC1P0CG37 223 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 SMR3AQ99954 134 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 C16orf95Q9H693 158 aa13.43□□□□□ -0.26
TSPAN4-210ENST00000464987 A8MZ25 164 aa13.42□□□□□ -0.26
TSPAN4-210ENST00000464987 RPL24P83731 157 aaKnown RBP13.42□□□□□ -0.26
TSPAN4-210ENST00000464987 DNAJC30Q96LL9 226 aa13.42□□□□□ -0.26
TSPAN4-210ENST00000464987 GAGE12HA6NDE8 117 aa13.41□□□□□ -0.26
TSPAN4-210ENST00000464987 SPATA25Q9BR10 227 aa13.41□□□□□ -0.26
TSPAN4-210ENST00000464987 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
TSPAN4-210ENST00000464987 EIF4EBP3O60516 100 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-210ENST00000464987 TIMM21Q9BVV7 248 aa13.4□□□□□ -0.26
TSPAN4-210ENST00000464987 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
TSPAN4-210ENST00000464987 RPL35AP18077 110 aaKnown RBP13.4□□□□□ -0.26
TSPAN4-210ENST00000464987 CKS1BP61024 79 aa13.4□□□□□ -0.26
TSPAN4-210ENST00000464987 PRO0461Q9UI25 63 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms