RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 TP53TG1Q9Y2A0 90 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 NIPBLQ6KC79 2804 aaeCLIP7.78□□□□□ -1.16
IFT88-204ENST00000461115 SMIM9A6NGZ8 99 aa7.78□□□□□ -1.16
IFT88-204ENST00000461115 RPL35AP18077 110 aaKnown RBP7.78□□□□□ -1.16
IFT88-204ENST00000461115 PRSS29PA6NIE9 313 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 RRN3P1Q2M238 152 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 Q6ZTI0 123 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 STPG4Q8N801 248 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 CHTOPQ9Y3Y2 248 aaKnown RBP7.77□□□□□ -1.17
IFT88-204ENST00000461115 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 VWFP04275 2813 aa7.77□□□□□ -1.17
IFT88-204ENST00000461115 TRGV1A0A0A0MS02 117 aa7.76□□□□□ -1.17
IFT88-204ENST00000461115 PMVKQ15126 192 aa7.76□□□□□ -1.17
IFT88-204ENST00000461115 PAPPA-AS1Q5QFB9 102 aa7.76□□□□□ -1.17
IFT88-204ENST00000461115 C2orf91Q6ZV80 131 aa7.76□□□□□ -1.17
IFT88-204ENST00000461115 LURAP1LQ8IV03 231 aa7.76□□□□□ -1.17
IFT88-204ENST00000461115 BAHCC1Q9P281 2608 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 IGHV3-73A0A0B4J1V6 119 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
IFT88-204ENST00000461115 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 CST9LQ9H4G1 147 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 Q9UF83 564 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 X6R8D5 127 aa7.75□□□□□ -1.17
IFT88-204ENST00000461115 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 IGKV2D-26A0A0A0MRZ7 120 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 TMEM238LA0A1B0GVL6 79 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 KRTAP24-1Q3LI83 254 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 AMELXQ99217 191 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 NOP10Q9NPE3 64 aaKnown RBP7.74□□□□□ -1.17
IFT88-204ENST00000461115 HIGD1BQ9P298 99 aa7.74□□□□□ -1.17
IFT88-204ENST00000461115 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
IFT88-204ENST00000461115 K7EQD1 137 aa7.73□□□□□ -1.17
IFT88-204ENST00000461115 TIMM21Q9BVV7 248 aa7.73□□□□□ -1.17
IFT88-204ENST00000461115 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
IFT88-204ENST00000461115 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
IFT88-204ENST00000461115 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
IFT88-204ENST00000461115 UBE2D3P61077 147 aa7.72□□□□□ -1.17
IFT88-204ENST00000461115 UBE2D2P62837 147 aa7.72□□□□□ -1.17
IFT88-204ENST00000461115 C12orf54Q6X4T0 127 aa7.72□□□□□ -1.17
IFT88-204ENST00000461115 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
IFT88-204ENST00000461115 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
IFT88-204ENST00000461115 A8MZ25 164 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 E9PLD3 99 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 APOC4P55056 127 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.17
IFT88-204ENST00000461115 COL5A1-AS1Q5SY13 56 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 PCP2Q8IVA1 136 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 SLC25A29Q8N8R3 303 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.17
IFT88-204ENST00000461115 TP73-AS1Q9UF72 201 aa7.71□□□□□ -1.17
IFT88-204ENST00000461115 TRRAPQ9Y4A5 3859 aa7.71□□□□□ -1.18
IFT88-204ENST00000461115 C11orf86A6NJI1 115 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 MRPS36P82909 103 aaKnown RBP7.7□□□□□ -1.18
IFT88-204ENST00000461115 EGFEM1PQ0D2K5 195 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 COTL1Q14019 142 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 FHL2Q14192 279 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 BVES-AS1Q5T3Y7 98 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 UBE2D4Q9Y2X8 147 aa7.7□□□□□ -1.18
IFT88-204ENST00000461115 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
IFT88-204ENST00000461115 MPV17L2Q567V2 206 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 A0A1B0GV90 55 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 GAGE12BA1L429 117 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 CYSRT1A8MQ03 144 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 LYRM9A8MSI8 78 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 GAGE7O76087 117 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 GAGE12FP0CL80 117 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 GAGE12GP0CL81 117 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 GAGE12IP0CL82 117 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 NMUP48645 174 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 ZNRF2Q8NHG8 242 aa7.69□□□□□ -1.18
IFT88-204ENST00000461115 CMYA5Q8N3K9 4069 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 TRGV2A0A075B6R0 118 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 H7C423 109 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 HINT1P49773 126 aaPredicted RBP7.68□□□□□ -1.18
IFT88-204ENST00000461115 HSD52Q0P140 79 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 NTM-AS1Q6ZSK4 140 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 PRIMA1Q86XR5 153 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 VCX2Q9H322 139 aa7.68□□□□□ -1.18
IFT88-204ENST00000461115 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 MIFP14174 115 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 TAL2Q16559 108 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 TMEM97Q5BJF2 176 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 MAPKAPK5-AS1Q8N8E1 139 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 DEFB104AQ8WTQ1 72 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 RNF183Q96D59 192 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
IFT88-204ENST00000461115 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
IFT88-204ENST00000461115 SEC11AP67812 179 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms