RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 DAZ4Q86SG3 579 aaKnown RBP3.61□□□□□ -1.83
SF3A3-202ENST00000460925 GPHB5Q86YW7 130 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 RPP25LQ8N5L8 163 aaKnown RBP3.61□□□□□ -1.83
SF3A3-202ENST00000460925 OR10AG1Q8NH19 301 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 DYNLRB2Q8TF09 96 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 IGF2BP2-AS1Q96M15 143 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 METTL26Q96S19 204 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 RHPN1-AS1Q9BWJ2 59 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 SLC25A2Q9BXI2 301 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 WFDC10AQ9H1F0 79 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 NRN1Q9NPD7 142 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 DAZ1Q9NQZ3 744 aaKnown RBP3.61□□□□□ -1.83
SF3A3-202ENST00000460925 DAZ3Q9NR90 486 aaKnown RBP3.61□□□□□ -1.83
SF3A3-202ENST00000460925 RABAC1Q9UI14 185 aa3.61□□□□□ -1.83
SF3A3-202ENST00000460925 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
SF3A3-202ENST00000460925 PKD1L1Q8TDX9 2849 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 C17orf112F2Z3M2 114 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 SMKR1H3BMG3 65 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 M0R2P5 195 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 LGALS9O00182 355 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 NUPR1O60356 82 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 DUSP14O95147 198 aaKnown RBP3.6□□□□□ -1.83
SF3A3-202ENST00000460925 PRB2P02812 416 aaPredicted RBP3.6□□□□□ -1.83
SF3A3-202ENST00000460925 ARL14EPLP0DKL9 152 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 BCL2P10415 239 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 CBLN1P23435 193 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 NPPCP23582 126 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 INSL3P51460 131 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 TMEM258P61165 79 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 TTC32Q5I0X7 151 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 NUP35Q8NFH5 326 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 OR10J6PQ8NGY7 276 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 C18orf32Q8TCD1 76 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 FAM167A-AS1Q96KT0 104 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 FAM19A4Q96LR4 140 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 SHANK2-AS3Q9BTD1 123 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 SMDT1Q9H4I9 107 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 RBM12B-AS1Q9P1G2 102 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 KLK5Q9Y337 293 aaPredicted RBP3.6□□□□□ -1.83
SF3A3-202ENST00000460925 TIMM9Q9Y5J7 89 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
SF3A3-202ENST00000460925 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.83
SF3A3-202ENST00000460925 TRAV4A0A0B4J268 109 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 A0A0U1RQV1 116 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 GRIFINA4D1Z8 144 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 MT-ND6P03923 174 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 CRYGAP11844 174 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 WFDC2Q14508 124 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 LAGE3Q14657 143 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 DEFB114Q30KQ6 69 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 C9orf153Q5TBE3 101 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 PCP2Q8IVA1 136 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 RNF182Q8N6D2 247 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
SF3A3-202ENST00000460925 PRELID3AQ96N28 172 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 SLC35B3Q9H1N7 401 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 ZNF331Q9NQX6 463 aaPredicted RBP3.59□□□□□ -1.83
SF3A3-202ENST00000460925 OTORQ9NRC9 128 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 DNAH9Q9NYC9 4486 aa3.59□□□□□ -1.83
SF3A3-202ENST00000460925 TRAV9-2A0A087WT02 112 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CTXND1A0A1B0GTU2 59 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
SF3A3-202ENST00000460925 H3BUT2 72 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 H7C1H1 209 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 ISLRO14498 428 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 UQCRQO14949 82 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CD7P09564 240 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 ZNF688P0C7X2 276 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CFC1P0CG37 223 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 GCHFRP30047 84 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 UBE2L3P68036 154 aaKnown RBP3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CCL20P78556 96 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 SERF2P84101 59 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 C9orf66Q5T8R8 295 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 TMEM256Q8N2U0 113 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 CMTM2Q8TAZ6 248 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 AP1S3Q96PC3 154 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 VGLL1Q99990 258 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 PAXXQ9BUH6 204 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 TP53TG3Q9ULZ0 132 aa3.58□□□□□ -1.84
SF3A3-202ENST00000460925 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
SF3A3-202ENST00000460925 TRAV8-2A0A0B4J237 113 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 A0A1B0GXF2 115 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 F6UB75 175 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 SYS1-DBNDD2H3BUS1 97 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 M0R3E3 92 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 SOCS3O14543 225 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 GDF5OSQ5U4N7 250 aa3.57□□□□□ -1.84
SF3A3-202ENST00000460925 SH2D6Q7Z4S9 175 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 535.4 ms