RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 TSLPQ969D9 159 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 Q96NJ1 140 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 MRC1P22897 1456 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 TEX14Q8IWB6 1497 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 FYCO1Q9BQS8 1478 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 PARP14Q460N5 1801 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 LAMC3Q9Y6N6 1575 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 LOC285556D6RIA3 1793 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 RPL37P61927 97 aaKnown RBP0.91□□□□□ -2.26
VBP1-202ENST00000460509 C10orf128Q5T292 105 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 SNHG12Q9BXW3 62 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 LENEPQ9Y5L5 61 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 V9GYV3 84 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 ARFGEF1Q9Y6D6 1849 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 ADGRL2O95490 1459 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 RAPGEF2Q9Y4G8 1499 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 DIP2CQ9Y2E4 1556 aa0.91□□□□□ -2.26
VBP1-202ENST00000460509 TRBV7-3A0A075B6L6 115 aa0.9□□□□□ -2.27
VBP1-202ENST00000460509 FAM213BQ8TBF2 198 aa0.9□□□□□ -2.27
VBP1-202ENST00000460509 MYOZ3Q8TDC0 251 aa0.9□□□□□ -2.27
VBP1-202ENST00000460509 NDUFA4L2Q9NRX3 87 aa0.9□□□□□ -2.27
VBP1-202ENST00000460509 MAGI1Q96QZ7 1491 aaPredicted RBP0.9□□□□□ -2.27
VBP1-202ENST00000460509 PRDM15P57071 1507 aaPredicted RBP0.89□□□□□ -2.27
VBP1-202ENST00000460509 CITO14578 2027 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 CHD3Q12873 2000 aaKnown RBP0.89□□□□□ -2.27
VBP1-202ENST00000460509 GOLGA3Q08378 1498 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 MT-ATP8P03928 68 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 SNCAP37840 140 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 CCL18P55774 89 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 SPINK13Q1W4C9 94 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 Q5VV11 94 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 MGST2Q99735 147 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 WFDC6Q9BQY6 131 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 TOP2BQ02880 1626 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 SCRIBQ14160 1630 aa0.89□□□□□ -2.27
VBP1-202ENST00000460509 SSC5DA1L4H1 1573 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 RB1CC1Q8TDY2 1594 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 MYH8P13535 1937 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 LAMA4Q16363 1823 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 PPP1R17O96001 155 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 UBE2D3P61077 147 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 UBE2D2P62837 147 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 COL5A1-AS1Q5SY13 56 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 FAM167A-AS1Q96KT0 104 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 IFT172Q9UG01 1749 aa0.88□□□□□ -2.27
VBP1-202ENST00000460509 CDK13Q14004 1512 aaKnown RBP0.88□□□□□ -2.27
VBP1-202ENST00000460509 DOCK2Q92608 1830 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 ANKRD36BQ8N2N9 1353 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 hADV29S1A0JD25 119 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 NAP1L6A6NFF2 107 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 GNG11P61952 73 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 Q0VG73 95 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 DYNLRB1Q9NP97 96 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 CDC42SE2Q9NRR3 84 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 ZMYM4Q5VZL5 1548 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 EHBP1L1Q8N3D4 1523 aa0.87□□□□□ -2.27
VBP1-202ENST00000460509 ZGRF1Q86YA3 2104 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 COL4A6Q14031 1691 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 GVQW2A0A096LPI5 108 aaPredicted RBP0.86□□□□□ -2.27
VBP1-202ENST00000460509 TRGV1A0A0A0MS02 117 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 TRAV22A0A0B4J277 110 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 HMGN4O00479 90 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 SPINT3P49223 89 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 AMELXQ99217 191 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 DPY30Q9C005 99 aa0.86□□□□□ -2.27
VBP1-202ENST00000460509 TENM3Q9P273 2699 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 HMGXB3Q12766 1538 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 KDM5AP29375 1690 aaKnown RBP0.85□□□□□ -2.27
VBP1-202ENST00000460509 TRAV1-2A0A0B4J238 106 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 LINC00032P0C843 101 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 ACYP2P14621 99 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 SPAG11BQ08648 103 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 SPAG11AQ6PDA7 123 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 SMIM11BQ8TCY0 68 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 BPESC1Q9GZL8 116 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 MARF1Q9Y4F3 1742 aaKnown RBP0.85□□□□□ -2.27
VBP1-202ENST00000460509 AP4S1Q9Y587 144 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 V9GYH0 126 aa0.85□□□□□ -2.27
VBP1-202ENST00000460509 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
VBP1-202ENST00000460509 SCN7AQ01118 1682 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 NINQ8N4C6 2090 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 NSD3Q9BZ95 1437 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 CRYM-AS1A6NIL9 109 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 GNGT2O14610 69 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 KRTDAPP60985 99 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 UBA52P62987 128 aaKnown RBP0.84□□□□□ -2.27
VBP1-202ENST00000460509 VMO1Q7Z5L0 202 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 SCP2D1Q9UJQ7 156 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 R4GMQ9 66 aa0.84□□□□□ -2.27
VBP1-202ENST00000460509 KIF21AQ7Z4S6 1674 aa0.84□□□□□ -2.28
VBP1-202ENST00000460509 TANC1Q9C0D5 1861 aa0.84□□□□□ -2.28
VBP1-202ENST00000460509 ARHGEF12Q9NZN5 1544 aa0.84□□□□□ -2.28
VBP1-202ENST00000460509 TMEM14DPA8MWL7 114 aa0.83□□□□□ -2.28
VBP1-202ENST00000460509 CHKB-CPT1BH3BT56 60 aa0.83□□□□□ -2.28
VBP1-202ENST00000460509 M0R135 149 aa0.83□□□□□ -2.28
VBP1-202ENST00000460509 ZNF137PP52743 207 aa0.83□□□□□ -2.28
VBP1-202ENST00000460509 GNG2P59768 71 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms