RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CRIP1P50238 77 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 TAS2R45P59539 299 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 RAB4BP61018 213 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 CACNG7P62955 275 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 FLI1Q01543 452 aaPredicted RBP2.19□□□□□ -2.06
RBM39-220ENST00000455343 PYDC2Q56P42 97 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 KHDC3LQ587J8 217 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 TMEM97Q5BJF2 176 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 SAPCD1Q5SSQ6 148 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 COX8CQ7Z4L0 72 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 C5orf17Q8NAS9 161 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 OR11H4Q8NGC9 324 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 SUN5Q8TC36 379 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 RPS10P5Q9NQ39 176 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
RBM39-220ENST00000455343 TRBV25-1A0A075B6N4 114 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
RBM39-220ENST00000455343 C17orf112F2Z3M2 114 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 ADAMTSL4-AS1Q5T5F5 129 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 CFAP161Q6P656 301 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 FER1L6-AS1Q8NA97 138 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
RBM39-220ENST00000455343 DERL1Q9BUN8 251 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 MRPS26Q9BYN8 205 aaKnown RBP2.18□□□□□ -2.06
RBM39-220ENST00000455343 EPDR1Q9UM22 224 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
RBM39-220ENST00000455343 A0A1W2PNN7 141 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 GRIFINA4D1Z8 144 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 FAM25EA8MYX2 175 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 B4DEV8 164 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 H0Y9J4 135 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 H3BMQ9 156 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 K7EQM0 130 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 M0R381 172 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 STAG3L2P0CL84 134 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 STAG3L3P0CL85 134 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 RAB5CP51148 216 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 TMBIM6P55061 237 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 CNPY1Q3B7I2 92 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 HIGD2BQ4VC39 106 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 PRNTQ86SH4 94 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 ZFP82Q8N141 532 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.17□□□□□ -2.06
RBM39-220ENST00000455343 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 AQP10Q96PS8 301 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 SDHCQ99643 169 aaPredicted RBP2.17□□□□□ -2.06
RBM39-220ENST00000455343 MED28Q9H204 178 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 PHLDA3Q9Y5J5 127 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 ARL2-SNX15V9GYD0 113 aa2.17□□□□□ -2.06
RBM39-220ENST00000455343 IGHV1-24A0A0C4DH33 117 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 A0A1W2PPV4 95 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 M0R036 132 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 PLA2G10O15496 165 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 SNAI2O43623 268 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 IGLV7-43P04211 117 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 TPT1P13693 172 aaKnown RBP2.16□□□□□ -2.06
RBM39-220ENST00000455343 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 RAB2AP61019 212 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 ZNF674Q2M3X9 581 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 PKIGQ9Y2B9 76 aa2.16□□□□□ -2.06
RBM39-220ENST00000455343 TRAV1-1A0A0B4J248 108 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 TRAV34A0A0B4J273 112 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 A0A1W2PRE2 83 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 CENPXA8MT69 81 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 M0QY20 66 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 HMGB3O15347 200 aaKnown RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 SH2D1AO60880 128 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 MT-ND6P03923 174 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 CXCL1P09341 107 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 ARL14EPLP0DKL9 152 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 GCHFRP30047 84 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 RPL12P30050 165 aaKnown RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 RPL13AP40429 203 aaKnown RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 SULT1A2P50226 295 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 ZNF56Q15929 161 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 TPRXLQ17RH7 258 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 Q86TA4 180 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 KRTAP11-1Q8IUC1 163 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 OR10AG1Q8NH19 301 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 CHCHD10Q8WYQ3 142 aaPredicted RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 LINC00526Q96FQ7 95 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 PGLYRP4Q96LB8 373 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 SEC22CQ9BRL7 303 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 TMEM243Q9BU79 118 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 ZNF471Q9BX82 626 aaPredicted RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 RPP21Q9H633 154 aaKnown RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 WFDC1Q9HC57 220 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 ZFP30Q9Y2G7 519 aa2.15□□□□□ -2.07
RBM39-220ENST00000455343 CARHSP1Q9Y2V2 147 aaKnown RBP2.15□□□□□ -2.07
RBM39-220ENST00000455343 TMSB15BA0A087X1C1 80 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 LOC107984640A0A0U1RRK4 108 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 OR5AL1P0C617 328 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 FGF6P10767 208 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 S100A5P33763 92 aa2.14□□□□□ -2.07
RBM39-220ENST00000455343 CDC34P49427 236 aaPredicted RBP2.14□□□□□ -2.07
RBM39-220ENST00000455343 CYCSP99999 105 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms