RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 WNK1Q9H4A3 2382 aa13.14□□□□□ -0.31
MECP2-205ENST00000453960 IGLV1-51P01701 117 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 RAB37Q96AX2 223 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 HIST1H4GQ99525 98 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 C12orf74Q32Q52 190 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 SAMD5Q5TGI4 173 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
MECP2-205ENST00000453960 ZNF418Q8TF45 676 aaPredicted RBP13.13□□□□□ -0.31
MECP2-205ENST00000453960 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
MECP2-205ENST00000453960 CHCHD7Q9BUK0 85 aa13.13□□□□□ -0.31
MECP2-205ENST00000453960 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
MECP2-205ENST00000453960 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 TMEM223A0PJW6 202 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 AZU1P20160 251 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 SPANXB1Q9NS25 103 aaPredicted RBP13.12□□□□□ -0.31
MECP2-205ENST00000453960 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 Q9UF83 564 aa13.12□□□□□ -0.31
MECP2-205ENST00000453960 A0A0J9YY99 117 aa13.11□□□□□ -0.31
MECP2-205ENST00000453960 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
MECP2-205ENST00000453960 EMP1P54849 157 aa13.11□□□□□ -0.31
MECP2-205ENST00000453960 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
MECP2-205ENST00000453960 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
MECP2-205ENST00000453960 MRPL16Q9NX20 251 aaKnown RBP13.11□□□□□ -0.31
MECP2-205ENST00000453960 K7ERJ3 54 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 FABP2P12104 132 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 ZNF22P17026 224 aaPredicted RBP13.1□□□□□ -0.31
MECP2-205ENST00000453960 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 IGLL5B9A064 214 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
MECP2-205ENST00000453960 FOSL1P15407 271 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 MRPS36P82909 103 aaKnown RBP13.1□□□□□ -0.31
MECP2-205ENST00000453960 VCX2Q9H322 139 aa13.1□□□□□ -0.31
MECP2-205ENST00000453960 LEPROTO15243 131 aa13.09□□□□□ -0.31
MECP2-205ENST00000453960 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
MECP2-205ENST00000453960 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
MECP2-205ENST00000453960 NAA38Q9BRA0 125 aaKnown RBP13.09□□□□□ -0.31
MECP2-205ENST00000453960 SPCS1Q9Y6A9 102 aa13.09□□□□□ -0.31
MECP2-205ENST00000453960 J3QQQ9 107 aa13.08□□□□□ -0.32
MECP2-205ENST00000453960 UBE2D1P51668 147 aa13.08□□□□□ -0.32
MECP2-205ENST00000453960 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
MECP2-205ENST00000453960 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
MECP2-205ENST00000453960 F8P00451 2351 aa13.08□□□□□ -0.32
MECP2-205ENST00000453960 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
MECP2-205ENST00000453960 MTORP42345 2549 aa13.07□□□□□ -0.32
MECP2-205ENST00000453960 A0A0J9YXV3 536 aa13.06□□□□□ -0.32
MECP2-205ENST00000453960 RBX1P62877 108 aa13.06□□□□□ -0.32
MECP2-205ENST00000453960 SCGB1D4Q6XE38 83 aa13.06□□□□□ -0.32
MECP2-205ENST00000453960 TIMM21Q9BVV7 248 aa13.06□□□□□ -0.32
MECP2-205ENST00000453960 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
MECP2-205ENST00000453960 SAP30O75446 220 aa13.05□□□□□ -0.32
MECP2-205ENST00000453960 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
MECP2-205ENST00000453960 TMEM238LA0A1B0GVL6 79 aa13.05□□□□□ -0.32
MECP2-205ENST00000453960 A6NJY4 79 aa13.05□□□□□ -0.32
MECP2-205ENST00000453960 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
MECP2-205ENST00000453960 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
MECP2-205ENST00000453960 CSNK1G2-AS1Q8NCQ2 148 aa13.04□□□□□ -0.32
MECP2-205ENST00000453960 C2CD3Q4AC94 2353 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 COTL1Q14019 142 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 OCIAD2Q56VL3 154 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 ZNF479Q96JC4 524 aa13.03□□□□□ -0.32
MECP2-205ENST00000453960 TINCRA0A1B0GVN0 87 aa13.02□□□□□ -0.32
MECP2-205ENST00000453960 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.32
MECP2-205ENST00000453960 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.32
MECP2-205ENST00000453960 OVOL2Q9BRP0 275 aa13.02□□□□□ -0.33
MECP2-205ENST00000453960 HIVEP1P15822 2718 aa13.01□□□□□ -0.33
MECP2-205ENST00000453960 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
MECP2-205ENST00000453960 CIDEAO60543 219 aa13.01□□□□□ -0.33
MECP2-205ENST00000453960 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
MECP2-205ENST00000453960 C16orf74Q96GX8 76 aa13.01□□□□□ -0.33
MECP2-205ENST00000453960 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
MECP2-205ENST00000453960 KRTAP10-3P60369 221 aa13□□□□□ -0.33
MECP2-205ENST00000453960 CEMP1Q6PRD7 247 aaPredicted RBP13□□□□□ -0.33
MECP2-205ENST00000453960 Q6ZTI0 123 aa13□□□□□ -0.33
MECP2-205ENST00000453960 SETD2Q9BYW2 2564 aaPredicted RBP13□□□□□ -0.33
MECP2-205ENST00000453960 K7EQD1 137 aa12.99□□□□□ -0.33
MECP2-205ENST00000453960 FAM19A3Q7Z5A8 133 aa12.99□□□□□ -0.33
MECP2-205ENST00000453960 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
MECP2-205ENST00000453960 IGHV3OR16-12A0A075B7B8 117 aa12.99□□□□□ -0.33
MECP2-205ENST00000453960 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
MECP2-205ENST00000453960 Q6ZUT4 128 aa12.99□□□□□ -0.33
MECP2-205ENST00000453960 NIPBLQ6KC79 2804 aaeCLIP12.98□□□□□ -0.33
MECP2-205ENST00000453960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
MECP2-205ENST00000453960 IGHV1-58A0A0C4DH39 117 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
MECP2-205ENST00000453960 TIRAPP58753 221 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 UBE2D3P61077 147 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 UBE2D2P62837 147 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 DAZ4Q86SG3 579 aaKnown RBP12.98□□□□□ -0.33
MECP2-205ENST00000453960 SBSPONQ8IVN8 264 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 DAZ3Q9NR90 486 aaKnown RBP12.98□□□□□ -0.33
MECP2-205ENST00000453960 CBY1Q9Y3M2 126 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 HIVEP2P31629 2446 aa12.98□□□□□ -0.33
MECP2-205ENST00000453960 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
MECP2-205ENST00000453960 IGHV3-30-3P0DP02 117 aa12.97□□□□□ -0.33
MECP2-205ENST00000453960 C10orf126Q8N4M7 172 aa12.97□□□□□ -0.33
MECP2-205ENST00000453960 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms