RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TMEM18Q96B42 140 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 C20orf78Q9BR46 151 aa14.8□□□□□ -0.04
C9orf3-208ENST00000451893 CDK2AP2O75956 126 aa14.79□□□□□ -0.04
C9orf3-208ENST00000451893 JPT2Q9H910 190 aa14.79□□□□□ -0.04
C9orf3-208ENST00000451893 NXT2Q9NPJ8 142 aaKnown RBP14.79□□□□□ -0.04
C9orf3-208ENST00000451893 DNAH11Q96DT5 4516 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 A0A087WWL8 130 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 F5H697 171 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 SMKR1H3BMG3 65 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 H7C1H1 209 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 NPYP01303 97 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 IQCJQ1A5X6 159 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 SH2D6Q7Z4S9 175 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 NRACQ8N912 160 aa14.78□□□□□ -0.04
C9orf3-208ENST00000451893 NCR2O95944 276 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 LINC00310P59036 64 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 RPL32P62910 135 aaKnown RBP14.77□□□□□ -0.05
C9orf3-208ENST00000451893 CFAP126Q5VTH2 177 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 UFSP1Q6NVU6 142 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 FA2HQ7L5A8 372 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 MAPKAPK5-AS1Q8N8E1 139 aa14.77□□□□□ -0.05
C9orf3-208ENST00000451893 HSBP1O75506 76 aa14.76□□□□□ -0.05
C9orf3-208ENST00000451893 FAM74A4Q5TZK3 123 aa14.76□□□□□ -0.05
C9orf3-208ENST00000451893 PRADC1Q9BSG0 188 aa14.76□□□□□ -0.05
C9orf3-208ENST00000451893 SAMD10Q9BYL1 202 aa14.76□□□□□ -0.05
C9orf3-208ENST00000451893 PCLOQ9Y6V0 5065 aa14.76□□□□□ -0.05
C9orf3-208ENST00000451893 DYNC1H1Q14204 4646 aaKnown RBP14.75□□□□□ -0.05
C9orf3-208ENST00000451893 K7EMI3 77 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 ZNF56Q15929 161 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 SUMO4Q6EEV6 95 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 WFDC10BQ8IUB3 73 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 HIST1H2BLQ99880 126 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 AP5S1Q9NUS5 200 aa14.75□□□□□ -0.05
C9orf3-208ENST00000451893 TRAV26-2A0A0B4J265 109 aa14.74□□□□□ -0.05
C9orf3-208ENST00000451893 TRBV6-5A0A0K0K1A5 114 aa14.74□□□□□ -0.05
C9orf3-208ENST00000451893 LINC01546A6NGU7 62 aa14.74□□□□□ -0.05
C9orf3-208ENST00000451893 NUPR1O60356 82 aa14.74□□□□□ -0.05
C9orf3-208ENST00000451893 RNASEKQ6P5S7 137 aaKnown RBP14.74□□□□□ -0.05
C9orf3-208ENST00000451893 Q8N8P6 123 aa14.74□□□□□ -0.05
C9orf3-208ENST00000451893 IGHV3-73A0A0B4J1V6 119 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 LOC100131303A0A0U1RQF7 123 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 K7EP13 123 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 M0QY20 66 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 IFI27P40305 119 aaPredicted RBP14.73□□□□□ -0.05
C9orf3-208ENST00000451893 KRTAP10-2P60368 255 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 SUMO2P61956 95 aaKnown RBP14.73□□□□□ -0.05
C9orf3-208ENST00000451893 PDZD11Q5EBL8 140 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 C10orf126Q8N4M7 172 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 NIT2Q9NQR4 276 aa14.73□□□□□ -0.05
C9orf3-208ENST00000451893 LOC389332A0A1B0GUA5 103 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 IFITM10A6NMD0 228 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 FABP4P15090 132 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 GATA1P15976 413 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-208ENST00000451893 RHOHQ15669 191 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 URB1-AS1Q96HZ7 61 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 ST20Q9HBF5 79 aa14.72□□□□□ -0.05
C9orf3-208ENST00000451893 TRAV8-6A0A0B4J262 113 aa14.71□□□□□ -0.05
C9orf3-208ENST00000451893 GAS8-AS1O95177 125 aa14.71□□□□□ -0.05
C9orf3-208ENST00000451893 AMTP48728 403 aa14.71□□□□□ -0.05
C9orf3-208ENST00000451893 TNFRSF18Q9Y5U5 241 aa14.71□□□□□ -0.05
C9orf3-208ENST00000451893 PSCAO43653 123 aa14.7□□□□□ -0.06
C9orf3-208ENST00000451893 Q6ZRN7 208 aaPredicted RBP14.7□□□□□ -0.06
C9orf3-208ENST00000451893 DNAJC30Q96LL9 226 aa14.7□□□□□ -0.06
C9orf3-208ENST00000451893 SMIM2Q9BVW6 85 aa14.7□□□□□ -0.06
C9orf3-208ENST00000451893 PGPEP1Q9NXJ5 209 aa14.7□□□□□ -0.06
C9orf3-208ENST00000451893 RYR1P21817 5038 aa14.69□□□□□ -0.06
C9orf3-208ENST00000451893 VCYO14598 125 aa14.69□□□□□ -0.06
C9orf3-208ENST00000451893 TCAPO15273 167 aa14.69□□□□□ -0.06
C9orf3-208ENST00000451893 DNAH10OSP0CZ25 163 aa14.69□□□□□ -0.06
C9orf3-208ENST00000451893 AKR1D1P51857 326 aa14.69□□□□□ -0.06
C9orf3-208ENST00000451893 IGHV3-38A0A0C4DH36 116 aa14.68□□□□□ -0.06
C9orf3-208ENST00000451893 G0S2P27469 103 aa14.68□□□□□ -0.06
C9orf3-208ENST00000451893 POLR2KP53803 58 aaKnown RBP14.68□□□□□ -0.06
C9orf3-208ENST00000451893 SLC25A29Q8N8R3 303 aa14.68□□□□□ -0.06
C9orf3-208ENST00000451893 RPL39LQ96EH5 51 aaKnown RBP14.68□□□□□ -0.06
C9orf3-208ENST00000451893 TRBV10-1A0A0K0K1A3 114 aa14.67□□□□□ -0.06
C9orf3-208ENST00000451893 TRBV6-4A0A1B0GX49 114 aa14.67□□□□□ -0.06
C9orf3-208ENST00000451893 OR10D4PQ8NGN7 298 aa14.67□□□□□ -0.06
C9orf3-208ENST00000451893 ORMDL2Q53FV1 153 aa14.66□□□□□ -0.06
C9orf3-208ENST00000451893 CDPF1Q6NVV7 123 aa14.66□□□□□ -0.06
C9orf3-208ENST00000451893 TRBV27A0A0K0K1C4 114 aa14.65□□□□□ -0.06
C9orf3-208ENST00000451893 LINC01549A6NIU2 74 aa14.65□□□□□ -0.06
C9orf3-208ENST00000451893 TIRAPP58753 221 aa14.65□□□□□ -0.06
C9orf3-208ENST00000451893 LAGE3Q14657 143 aa14.65□□□□□ -0.06
C9orf3-208ENST00000451893 TMEM70Q9BUB7 260 aa14.65□□□□□ -0.06
C9orf3-208ENST00000451893 IGHV1-24A0A0C4DH33 117 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 SDHAF1A6NFY7 115 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 FCER1GP30273 86 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 FAM19A2Q8N3H0 131 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 ATP6V0E2Q8NHE4 81 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 HSPB8Q9UJY1 196 aa14.64□□□□□ -0.07
C9orf3-208ENST00000451893 A0A087WTM6 91 aa14.63□□□□□ -0.07
C9orf3-208ENST00000451893 HBDP02042 147 aa14.63□□□□□ -0.07
C9orf3-208ENST00000451893 FUSP35637 526 aaKnown RBP eCLIP14.63□□□□□ -0.07
C9orf3-208ENST00000451893 LEPROTL1O95214 131 aa14.62□□□□□ -0.07
C9orf3-208ENST00000451893 Q8N1X5 172 aa14.62□□□□□ -0.07
C9orf3-208ENST00000451893 KRTAP4-5Q9BYR2 181 aa14.62□□□□□ -0.07
C9orf3-208ENST00000451893 Q9HAA7 133 aa14.62□□□□□ -0.07
C9orf3-208ENST00000451893 I3L3M4 83 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms