RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
PRPF40A-203ENST00000448428 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
PRPF40A-203ENST00000448428 COTL1Q14019 142 aa8.38□□□□□ -1.07
PRPF40A-203ENST00000448428 MIAQ16674 131 aa8.38□□□□□ -1.07
PRPF40A-203ENST00000448428 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
PRPF40A-203ENST00000448428 TMEM191AQ9H0A3 160 aa8.38□□□□□ -1.07
PRPF40A-203ENST00000448428 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 A0A1B0GUV1 79 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 GAS8-AS1O95177 125 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 AMTP48728 403 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
PRPF40A-203ENST00000448428 HSPG2P98160 4391 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 RAB4AP20338 218 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 REG3AQ06141 175 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 RIGQ13278 110 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
PRPF40A-203ENST00000448428 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 UBE2L6O14933 153 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 KRTAP26-1Q6PEX3 210 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
PRPF40A-203ENST00000448428 NCR2O95944 276 aa8.34□□□□□ -1.07
PRPF40A-203ENST00000448428 HAMPP81172 84 aa8.34□□□□□ -1.07
PRPF40A-203ENST00000448428 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
PRPF40A-203ENST00000448428 IGLV10-54A0A075B6I4 117 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 I3L3M4 83 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 HLA-DQA1P01909 254 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 APOBP04114 4563 aaKnown RBP8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 PMCHP20382 165 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 RAB14P61106 215 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 MRAP2Q96G30 205 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
PRPF40A-203ENST00000448428 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
PRPF40A-203ENST00000448428 APCSP02743 223 aa8.32□□□□□ -1.08
PRPF40A-203ENST00000448428 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
PRPF40A-203ENST00000448428 POLR2KP53803 58 aaKnown RBP8.32□□□□□ -1.08
PRPF40A-203ENST00000448428 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 TRAV8-4A0A0B4J246 113 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 SMKR1H3BMG3 65 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 H7C423 109 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 TSHBP01222 138 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 CAMPP49913 170 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
PRPF40A-203ENST00000448428 PRSS1P07477 247 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 ESDP10768 282 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 MRPL51Q4U2R6 128 aaKnown RBP8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 FAM104BQ5XKR9 115 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 AMMECR1LQ6DCA0 310 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 Q6ZSA8 131 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 NRACQ8N912 160 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 TMEM242Q9NWH2 141 aa8.3□□□□□ -1.08
PRPF40A-203ENST00000448428 TRBV27A0A0K0K1C4 114 aa8.29□□□□□ -1.08
PRPF40A-203ENST00000448428 FGF6P10767 208 aa8.29□□□□□ -1.08
PRPF40A-203ENST00000448428 RNASEKQ6P5S7 137 aaKnown RBP8.29□□□□□ -1.08
PRPF40A-203ENST00000448428 IGKV3OR2-268A0A0C4DH90 116 aa8.28□□□□□ -1.08
PRPF40A-203ENST00000448428 A0A1B0GW15 77 aa8.28□□□□□ -1.08
PRPF40A-203ENST00000448428 VCYO14598 125 aa8.28□□□□□ -1.08
PRPF40A-203ENST00000448428 CLLU1Q5K131 121 aa8.28□□□□□ -1.08
PRPF40A-203ENST00000448428 MRPL54Q6P161 138 aaKnown RBP8.28□□□□□ -1.08
PRPF40A-203ENST00000448428 LINC00862A6NCI5 91 aa8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 PPP1R17O96001 155 aa8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 IFITM2Q01629 132 aa8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 Q5VSD8 79 aa8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 DGAT2L7PQ6IED9 249 aa8.27□□□□□ -1.09
PRPF40A-203ENST00000448428 A0A1B0GXF2 115 aa8.26□□□□□ -1.09
PRPF40A-203ENST00000448428 PPP1R2P9O14990 202 aa8.26□□□□□ -1.09
PRPF40A-203ENST00000448428 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
PRPF40A-203ENST00000448428 HBBP68871 147 aa8.26□□□□□ -1.09
PRPF40A-203ENST00000448428 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
PRPF40A-203ENST00000448428 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 F8W036 122 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 S100A8P05109 93 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 FCER1GP30273 86 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 CKS2P33552 79 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 PNRC1Q12796 327 aaPredicted RBP8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 C9orf163Q8N9P6 203 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 CHCHD10Q8WYQ3 142 aaPredicted RBP8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 BTF3L4Q96K17 158 aa8.25□□□□□ -1.09
PRPF40A-203ENST00000448428 hDV102S1A0JD36 115 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 OR5A1Q8NGJ0 315 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
PRPF40A-203ENST00000448428 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms