RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 SYNMO15061 1565 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 SYNJ1O43426 1573 aa-0.8□□□□□ -2.54
SNHG3-203ENST00000447507 DNAJC13O75165 2243 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 CCDC179H3BU77 68 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 SPINK4O60575 86 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 PAEPP09466 180 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 HLA-DRB4P13762 266 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 CCL18P55774 89 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 UBE2G1P62253 170 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 DEFB112Q30KQ8 113 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 TMEM244Q5VVB8 128 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 MIC13Q5XKP0 118 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 ATP11AUNQ6ZP68 121 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 TMED4Q7Z7H5 227 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 SPTSSBQ8NFR3 76 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 LINC00312Q9Y6C7 94 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 HLA-DRB4X5D2U9 266 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 UHRF1BP1LA0JNW5 1464 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 PRDM2Q13029 1718 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 APOBP04114 4563 aaKnown RBP-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 OVOS2A0A0G2JMS6 1433 aa-0.81□□□□□ -2.54
SNHG3-203ENST00000447507 EIF3AQ14152 1382 aaKnown RBP-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 COL12A1Q99715 3063 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 NIPBLQ6KC79 2804 aaeCLIP-0.82□□□□□ -2.541e-72■■■□□ 17.9
SNHG3-203ENST00000447507 TACC2O95359 2948 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 BORCS7-ASMTA0A0B4J1R7 106 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 TMEM238C9JI98 176 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 M0R135 149 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 PIRTP0C851 137 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 G0S2P27469 103 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 MRPS25P82663 173 aaKnown RBP-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 S100A7L2Q5SY68 101 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 Q6JHZ5 121 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 DEFB123Q8N688 67 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 LINC00472Q9H8W2 130 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 CALML5Q9NZT1 146 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 HTTP42858 3142 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 PLECQ15149 4684 aaKnown RBP-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 MRC1P22897 1456 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 CASKIN1Q8WXD9 1431 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 XIRP1Q702N8 1843 aaKnown RBP-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 ZFHX3Q15911 3703 aa-0.82□□□□□ -2.54
SNHG3-203ENST00000447507 FASNP49327 2511 aaKnown RBP-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 ITPR3Q14573 2671 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 CTXND1A0A1B0GTU2 59 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 DPM2O94777 84 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 FAM107AO95990 144 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 PPP1R17O96001 155 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 TNFP01375 233 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 RBP4P02753 201 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 SMIM6P0DI80 62 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 S100A3P33764 101 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 MNS1Q8NEH6 495 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 BOLA2Q9H3K6 86 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 RPRMQ9NS64 109 aa-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 TNRC18O15417 2968 aaPredicted RBP-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 ANK3Q12955 4377 aaKnown RBP-0.83□□□□□ -2.54
SNHG3-203ENST00000447507 HMGXB3Q12766 1538 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 WDR87Q6ZQQ6 2873 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 LRRC37A3O60309 1634 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 SMIM24O75264 130 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 SPANXN1Q5VSR9 72 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 TRIQKQ629K1 86 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 RPL7L1Q6DKI1 246 aaKnown RBP-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 OR8I2Q8N0Y5 310 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 VSTM2AQ8TAG5 236 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 STOML2Q9UJZ1 356 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 APLNQ9ULZ1 77 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 NSD3Q9BZ95 1437 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 LRRC37A2A6NM11 1700 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 ARHGEF10O15013 1369 aa-0.84□□□□□ -2.54
SNHG3-203ENST00000447507 GAPVD1Q14C86 1478 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 FAM236AA0A1B0GUQ0 79 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 FAM236BA0A1B0GV22 79 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 GNG10P50151 68 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 RRAS2P62070 204 aaPredicted RBP-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 TMEM170BQ5T4T1 132 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 TMEM35BQ8NCS4 154 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 OR9Q1Q8NGQ5 310 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 CHMP6Q96FZ7 201 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 PCBD2Q9H0N5 130 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 MGAM2Q2M2H8 2515 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 DNAH11Q96DT5 4516 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 CMYA5Q8N3K9 4069 aa-0.85□□□□□ -2.55
SNHG3-203ENST00000447507 LAMA1P25391 3075 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 TRBV20-1A0A075B6N2 111 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 LINC00959A0A1B0GUT2 108 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 H0YJX3 145 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 TNFSF15O95150 251 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 TMEM128Q5BJH2 165 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 SAMD13Q5VXD3 122 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 ZNF818PQ6ZRF7 136 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 SMIM4Q8WVI0 70 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 AMELXQ99217 191 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 HIGD1AQ9Y241 93 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 R4GMQ9 66 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 KIF21AQ7Z4S6 1674 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 CCDC168Q8NDH2 2452 aa-0.86□□□□□ -2.55
SNHG3-203ENST00000447507 MYH8P13535 1937 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms