RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
PIKFYVE-206ENST00000443896 PEMTQ9UBM1 199 aa11.97□□□□□ -0.49
PIKFYVE-206ENST00000443896 TRAV2A0A0B4J234 112 aa11.97□□□□□ -0.49
PIKFYVE-206ENST00000443896 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
PIKFYVE-206ENST00000443896 A8MTW9 85 aa11.96□□□□□ -0.49
PIKFYVE-206ENST00000443896 NDUFA11Q86Y39 141 aa11.96□□□□□ -0.49
PIKFYVE-206ENST00000443896 Q1RN00 199 aa11.96□□□□□ -0.5
PIKFYVE-206ENST00000443896 F5H697 171 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 DEFB131AP59861 70 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 DUX3Q96PT4 197 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 TRBV6-5A0A0K0K1A5 114 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 CRYGDP07320 174 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 UBE2D3P61077 147 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 UBE2D2P62837 147 aa11.95□□□□□ -0.5
PIKFYVE-206ENST00000443896 VCYO14598 125 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 Q6ZSV7 163 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 TRGV11A0A075B6L2 103 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 KHDC1LQ5JSQ8 128 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 FAM74A4Q5TZK3 123 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 TMEM61Q8N0U2 210 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 CFC1P0CG37 223 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1CP0DJD4 496 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1FQ15415 496 aaKnown RBP11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 ZNF56Q15929 161 aa11.94□□□□□ -0.5
PIKFYVE-206ENST00000443896 NBPF19A0A087WUL8 3843 aa11.93□□□□□ -0.5
PIKFYVE-206ENST00000443896 H3BMM0 161 aa11.93□□□□□ -0.5
PIKFYVE-206ENST00000443896 IGHV3-64A0A075B6Q5 118 aa11.93□□□□□ -0.5
PIKFYVE-206ENST00000443896 TRBV27A0A0K0K1C4 114 aa11.93□□□□□ -0.5
PIKFYVE-206ENST00000443896 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 SDHAF1A6NFY7 115 aa11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 M0QY20 66 aa11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 UBE2D1P51668 147 aa11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 ZNF256Q9Y2P7 627 aaPredicted RBP11.92□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1BA6NDE4 496 aaKnown RBP11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1EA6NEQ0 496 aaKnown RBP11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 RBMY1DP0C7P1 496 aaKnown RBP11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 ZNF876PQ49A33 203 aa11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 TP53TG1Q9Y2A0 90 aa11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
PIKFYVE-206ENST00000443896 AKAP9Q99996 3911 aa11.9□□□□□ -0.5
PIKFYVE-206ENST00000443896 TSHBP01222 138 aa11.9□□□□□ -0.5
PIKFYVE-206ENST00000443896 DEFB114Q30KQ6 69 aa11.9□□□□□ -0.5
PIKFYVE-206ENST00000443896 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.5
PIKFYVE-206ENST00000443896 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
PIKFYVE-206ENST00000443896 SORL1Q92673 2214 aa11.9□□□□□ -0.51
PIKFYVE-206ENST00000443896 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
PIKFYVE-206ENST00000443896 ITPR3Q14573 2671 aa11.89□□□□□ -0.51
PIKFYVE-206ENST00000443896 HIST2H2BDQ6DRA6 164 aa11.89□□□□□ -0.51
PIKFYVE-206ENST00000443896 VCX2Q9H322 139 aa11.89□□□□□ -0.51
PIKFYVE-206ENST00000443896 ESM1Q9NQ30 184 aa11.89□□□□□ -0.51
PIKFYVE-206ENST00000443896 LYRM7Q5U5X0 104 aa11.88□□□□□ -0.51
PIKFYVE-206ENST00000443896 TMEM141Q96I45 108 aa11.88□□□□□ -0.51
PIKFYVE-206ENST00000443896 TIMM17AQ99595 171 aa11.88□□□□□ -0.51
PIKFYVE-206ENST00000443896 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
PIKFYVE-206ENST00000443896 KRTAP1-1Q07627 177 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 CUBNO60494 3623 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 TENM4Q6N022 2769 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 A4D1N5 150 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 RHOHQ15669 191 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 EDA2RQ9HAV5 297 aa11.86□□□□□ -0.51
PIKFYVE-206ENST00000443896 HTN1P15515 57 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 TSPEAR-AS2P59090 65 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 NPC2P61916 151 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 PMVKQ15126 192 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 A0A0J9YY99 117 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 HERVK_113P61574 105 aa11.85□□□□□ -0.51
PIKFYVE-206ENST00000443896 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 C11orf86A6NJI1 115 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 PIK3CD-AS1Q5SR53 167 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 LINC00467Q9BRT7 94 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 ZNF22P17026 224 aaPredicted RBP11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
PIKFYVE-206ENST00000443896 TRAV25A0A0B4J276 109 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 M0R2P5 195 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 TLN2Q9Y4G6 2542 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 ADARB2-AS1A8MUL3 147 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 I3L3M4 83 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 PRM2P04554 102 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 LINC01587Q99440 93 aa11.83□□□□□ -0.52
PIKFYVE-206ENST00000443896 EIF4EBP3O60516 100 aaPredicted RBP11.82□□□□□ -0.52
PIKFYVE-206ENST00000443896 P0DMU3 169 aa11.82□□□□□ -0.52
PIKFYVE-206ENST00000443896 FAM231AP0DMU4 169 aa11.82□□□□□ -0.52
PIKFYVE-206ENST00000443896 FAM231CP0DMU5 169 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms