RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
CPNE1-218ENST00000439806 ZNF479Q96JC4 524 aa7.53□□□□□ -1.2
CPNE1-218ENST00000439806 AMELXQ99217 191 aa7.53□□□□□ -1.2
CPNE1-218ENST00000439806 SMR3AQ99954 134 aa7.53□□□□□ -1.2
CPNE1-218ENST00000439806 CREBBPQ92793 2442 aa7.53□□□□□ -1.2
CPNE1-218ENST00000439806 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
CPNE1-218ENST00000439806 A0A0J9YY99 117 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
CPNE1-218ENST00000439806 K7EQD1 137 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
CPNE1-218ENST00000439806 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
CPNE1-218ENST00000439806 WFDC10AQ9H1F0 79 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
CPNE1-218ENST00000439806 UBE2D4Q9Y2X8 147 aa7.52□□□□□ -1.21
CPNE1-218ENST00000439806 LRRK2Q5S007 2527 aa7.51□□□□□ -1.21
CPNE1-218ENST00000439806 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE12BA1L429 117 aa7.51□□□□□ -1.21
CPNE1-218ENST00000439806 CEMP1Q6PRD7 247 aaPredicted RBP7.51□□□□□ -1.21
CPNE1-218ENST00000439806 Q6ZTI0 123 aa7.51□□□□□ -1.21
CPNE1-218ENST00000439806 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
CPNE1-218ENST00000439806 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 A0A1B0GWB2 263 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
CPNE1-218ENST00000439806 SMAGPQ0VAQ4 97 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 RRN3P1Q2M238 152 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
CPNE1-218ENST00000439806 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 Q6ZUT4 128 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 TIMM21Q9BVV7 248 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 C19orf73Q9NVV2 129 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 Q9UF83 564 aa7.5□□□□□ -1.21
CPNE1-218ENST00000439806 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE7O76087 117 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE12FP0CL80 117 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE12GP0CL81 117 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE12IP0CL82 117 aa7.49□□□□□ -1.21
CPNE1-218ENST00000439806 DAZ2Q13117 558 aaKnown RBP7.49□□□□□ -1.21
CPNE1-218ENST00000439806 GEMIN7Q9H840 131 aaKnown RBP7.49□□□□□ -1.21
CPNE1-218ENST00000439806 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE12JA6NER3 117 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 CIDEAO60543 219 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 GIG44P09565 113 aaPredicted RBP7.48□□□□□ -1.21
CPNE1-218ENST00000439806 KRTAP10-3P60369 221 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE4Q13068 117 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE5Q13069 117 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
CPNE1-218ENST00000439806 LINC00482Q8N8I6 264 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 SLC25A29Q8N8R3 303 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 FAM104AQ969W3 186 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
CPNE1-218ENST00000439806 WNK1Q9H4A3 2382 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 ABCA12Q86UK0 2595 aa7.48□□□□□ -1.21
CPNE1-218ENST00000439806 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 APOMO95445 188 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 IGHV3-30-3P0DP02 117 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 UBE2D1P51668 147 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 OCIAD2Q56VL3 154 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 ITPR3Q14573 2671 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 CRYBG3Q68DQ2 2970 aa7.47□□□□□ -1.21
CPNE1-218ENST00000439806 TRGV4A0A0C4DH28 118 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 IGHV1-58A0A0C4DH39 117 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 K7ERU9 68 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 IGHV3-30P01768 117 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 UBE2D3P61077 147 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 UBE2D2P62837 147 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 OVOL2Q9BRP0 275 aa7.46□□□□□ -1.22
CPNE1-218ENST00000439806 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 PLAC8L1A1L4L8 177 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 INAFM1C9JVW0 142 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 UBE2L6O14933 153 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 TIRAPP58753 221 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
CPNE1-218ENST00000439806 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 LYRM7Q5U5X0 104 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 CSNK1G2-AS1Q8NCQ2 148 aa7.45□□□□□ -1.22
CPNE1-218ENST00000439806 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
CPNE1-218ENST00000439806 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
CPNE1-218ENST00000439806 TRBV6-4A0A1B0GX49 114 aa7.44□□□□□ -1.22
CPNE1-218ENST00000439806 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
CPNE1-218ENST00000439806 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
CPNE1-218ENST00000439806 TSPAN13O95857 204 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 INSL3P51460 131 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 HERVK_113P63121 156 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 NTM-AS1Q6ZSK4 140 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 SBSPONQ8IVN8 264 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 C10orf126Q8N4M7 172 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 TMEM101Q96IK0 257 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 VSIG2Q96IQ7 327 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 GTSF1LQ9H1H1 148 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
CPNE1-218ENST00000439806 ZFHX3Q15911 3703 aa7.43□□□□□ -1.22
CPNE1-218ENST00000439806 APCP25054 2843 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms