RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 Q6ZSN1 163 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 C18orf15Q96N68 181 aa6.31□□□□□ -1.4
AC011228.1-201ENST00000439027 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 C1orf196B1AJZ1 125 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 SIVA1O15304 175 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 CIDEAO60543 219 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 BTF3P20290 206 aaKnown RBP6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 FHL2Q14192 279 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 SUMO4Q6EEV6 95 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 Q8N1X5 172 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 PRELID3AQ96N28 172 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
AC011228.1-201ENST00000439027 PHOX2AO14813 284 aa6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 PPBPP02775 128 aa6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 SRIP30626 198 aa6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 ORMDL3Q8N138 153 aa6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 ALKBH7Q9BT30 221 aaPredicted RBP6.29□□□□□ -1.4
AC011228.1-201ENST00000439027 H7C1H1 209 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 M0QY20 66 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 TNFRSF6BO95407 300 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 NPYP01303 97 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 OR10J3Q5JRS4 329 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 Q9UF83 564 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
AC011228.1-201ENST00000439027 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 TRBV6-4A0A1B0GX49 114 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 K7EQD1 137 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 FUSP35637 526 aaKnown RBP eCLIP6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 CRYBA4P53673 196 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 RAB5BP61020 215 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 NRACQ8N912 160 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
AC011228.1-201ENST00000439027 TRAV9-2A0A087WT02 112 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 PPP1R17O96001 155 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 IQCJQ1A5X6 159 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 NEGR1Q7Z3B1 354 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 PRADC1Q9BSG0 188 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 ST20Q9HBF5 79 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 LAMTOR2Q9Y2Q5 125 aa6.26□□□□□ -1.41
AC011228.1-201ENST00000439027 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 GAGE12JA6NER3 117 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 GAGE1Q13065 139 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 GAGE4Q13068 117 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 GAGE5Q13069 117 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 RHOHQ15669 191 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 C18orf32Q8TCD1 76 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 MAP1LC3AQ9H492 121 aa6.25□□□□□ -1.41
AC011228.1-201ENST00000439027 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 SDHAF1A6NFY7 115 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 PRSS47A8MTI9 375 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 GYPEP15421 78 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 RPL36AP83881 106 aaKnown RBP6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 BAGE3Q86Y29 109 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 RPL36ALQ969Q0 106 aaKnown RBP6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 DNAJC30Q96LL9 226 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 C20orf78Q9BR46 151 aa6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
AC011228.1-201ENST00000439027 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 VCYO14598 125 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 IFI27P40305 119 aaPredicted RBP6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 POLR2KP53803 58 aaKnown RBP6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 NDUFA6P56556 154 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 Q0VG73 95 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 NIT1Q86X76 327 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 TMEM70Q9BUB7 260 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
AC011228.1-201ENST00000439027 A0A087WTM6 91 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms