RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 TJP1Q07157 1748 aa1.86□□□□□ -2.11
LSM1P1-201ENST00000438629 SNRNP200O75643 2136 aaKnown RBP1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 MED12LQ86YW9 2145 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 COL14A1Q05707 1796 aaKnown RBP1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 THADAQ6YHU6 1953 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 C5orf67F2Z3F1 127 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 FXYD1O00168 92 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 BCE1O60756 84 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 CLPSP04118 112 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 DEFA4P12838 97 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 ZNF22P17026 224 aaPredicted RBP1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 GCHFRP30047 84 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 SMIM11AP58511 58 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 ROMO1P60602 79 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 SPANXN5Q5MJ07 72 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 C6orf201Q7Z4U5 140 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 VMO1Q7Z5L0 202 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM223AQ8IWN6 122 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 PKD1L3Q7Z443 1732 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 FMN2Q9NZ56 1722 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
LSM1P1-201ENST00000438629 ZNF236Q9UL36 1845 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 USP32Q8NFA0 1604 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 MYO16Q9Y6X6 1858 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 C3P01024 1663 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM208AQ9UK61 1670 aaKnown RBP1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 IGHV3-64A0A075B6Q5 118 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 TRBV7-1A0A0A6YYK4 115 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 TRBV10-3A0A0K0K1G6 114 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 C11orf86A6NJI1 115 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 HCG22E2RYF7 251 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 CPSF4O95639 269 aaKnown RBP1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 IGLV6-57P01721 117 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 CRPP02741 224 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 P0C880 135 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 PRB4P10163 310 aaPredicted RBP1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 DEFB121Q5J5C9 76 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 FAM27BQ5VT28 67 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 CASC2Q6XLA1 102 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 BAGE3Q86Y29 109 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 BAGE2Q86Y30 109 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 CYP4F30PQ9H0H9 118 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 DYNLRB1Q9NP97 96 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 ARL2-SNX15V9GYD0 113 aa1.84□□□□□ -2.11
LSM1P1-201ENST00000438629 LAMA4Q16363 1823 aa1.84□□□□□ -2.12
LSM1P1-201ENST00000438629 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.12
LSM1P1-201ENST00000438629 MYO9BQ13459 2157 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 PTPRSQ13332 1948 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 PARP4Q9UKK3 1724 aaKnown RBP1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 PLXNB1O43157 2135 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 UBE2D3P61077 147 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 UBE2D2P62837 147 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 C9orf116Q5BN46 136 aaPredicted RBP1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 PSMG4Q5JS54 123 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 ZNF826PQ6ZT77 177 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 LYPD6Q86Y78 171 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 FAM167A-AS1Q96KT0 104 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 FAM103A1Q9BTL3 118 aaKnown RBP1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 PRO1854Q9UHT4 67 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 CPAMD8Q8IZJ3 1885 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 GREB1Q4ZG55 1949 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 DLG5Q8TDM6 1919 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 NHSQ6T4R5 1651 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 RREB1Q92766 1687 aa1.83□□□□□ -2.12
LSM1P1-201ENST00000438629 NUMA1Q14980 2115 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 KIAA1549LQ6ZVL6 1849 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 SEC16AO15027 2179 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 SLIT2O94813 1529 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 ADGRB2O60241 1585 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 LCTP09848 1927 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 ERCC6L2Q5T890 1561 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 IGKV1D-42A0A075B6H8 117 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 TRBV6-7A0A0A0MS04 114 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 A0A0J9YX75 114 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 A6NIN4 97 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 IQCF6A8MYZ5 107 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 HCRTO43612 131 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 HMGN2P05204 90 aaKnown RBP1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 ERHP84090 104 aaKnown RBP1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 NNATQ16517 81 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 KRTAP25-1Q3LHN0 102 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 Q6ZQT0 140 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 ZCCHC23Q6ZST2 131 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 C20orf197Q8N268 126 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 TOMM5Q8N4H5 51 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 Q8N6K4 173 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 BPESC1Q9GZL8 116 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 C14orf132Q9NPU4 83 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 PSORS1C2Q9UIG4 136 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 CD163L1Q9NR16 1453 aa1.82□□□□□ -2.12
LSM1P1-201ENST00000438629 EML5Q05BV3 1969 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms