RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DYNLRB2Q8TF09 96 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 LSM10Q969L4 123 aaKnown RBP1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 BORCS8Q96FH0 119 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 C2orf50Q96LR7 162 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 PACRGQ96M98 296 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 AQP10Q96PS8 301 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 YPEL2Q96QA6 119 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 PECRQ9BY49 303 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 ATG5Q9H1Y0 275 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 CACFD1Q9UGQ2 172 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 TNFSF18Q9UNG2 199 aa1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 PUS1Q9Y606 427 aaKnown RBP eCLIP1.03□□□□□ -2.24
HMGB1P31-201ENST00000437242 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 TRAV10A0A0B4J240 114 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 TRAV1-1A0A0B4J248 108 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 TEX50A0A1B0GTY4 177 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 H3BRN7 92 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 GPR31O00270 319 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 SDCBPO00560 298 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 GEMIN2O14893 280 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 DEGS1O15121 323 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 PPYP01298 95 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 IFNA10P01566 189 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 IFNA7P01567 189 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 IFNA4P05014 189 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 REG1AP05451 166 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 NMBP08949 121 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 CXCL2P19875 107 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 OR10J1P30954 320 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 RAB5CP51148 216 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 EMP1P54849 157 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 FXYD7P58549 80 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 GNG2P59768 71 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 HERVK_113P63121 156 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 EIF5AP63241 154 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 RHOGP84095 191 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 TMEM267Q0VDI3 215 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 PPP1R1AQ13522 171 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 FXYD3Q14802 87 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 NMSQ5H8A3 153 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 OR10K2Q6IF99 312 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 AMTNQ6UX39 209 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 ZNF833PQ6ZTB9 187 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 LINC00311Q8N616 119 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 OR2T35Q8NGX2 323 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 OR4K15Q8NH41 348 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 RNASE11Q8TAA1 199 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 MRPL30Q8TCC3 161 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 PPP1R1CQ8WVI7 109 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 ARHGAP5-AS1Q96IT6 56 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 PHB2Q99623 299 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 CMSS1Q9BQ75 279 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 GINS4Q9BRT9 223 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 GINS3Q9BRX5 216 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 TMEM222Q9H0R3 208 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 PLEKHJ1Q9NW61 149 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 METTL1Q9UBP6 276 aaKnown RBP1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 AK3Q9UIJ7 227 aa1.02□□□□□ -2.25
HMGB1P31-201ENST00000437242 C3orf85A0A1B0GTC6 90 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 LINC00854A0A1B0GVQ3 168 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 UMAD1C9J7I0 102 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 GNRH2O43555 120 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 PGLYRP1O75594 196 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ATG12O94817 140 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 MT-CO2P00403 227 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 CFDP00746 253 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ATP5G1P05496 136 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 SCTP09683 121 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 C8orf88P0DMB2 117 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 CRYBB3P26998 211 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 PIGPP57054 158 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ARPC4P59998 168 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 HLA-DRB3P79483 266 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 SERF2P84101 59 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 SMAGPQ0VAQ4 97 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 MORN2Q502X0 79 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 AKIRIN2Q53H80 203 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 EIF5AL1Q6IS14 154 aaKnown RBP1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 TMEM14EPQ6UXP3 125 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 DPPA3Q6W0C5 159 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 C6orf201Q7Z4U5 140 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ATP5L2Q7Z4Y8 100 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 BAP18Q8IXM2 172 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ZNF565Q8N9K5 539 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 OR4X1Q8NH49 305 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 LHFPL5Q8TAF8 219 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 Q8WTZ3 238 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 MBD3L1Q8WWY6 194 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 ARL11Q969Q4 196 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 GPER1Q99527 375 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 S100A13Q99584 98 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 PSMG3Q9BT73 122 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 GGACTQ9BVM4 153 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 FXYD6Q9H0Q3 95 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 BANF2Q9H503 90 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 NAA60Q9H7X0 242 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 TMEM242Q9NWH2 141 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 JPT1Q9UK76 154 aa1.01□□□□□ -2.25
HMGB1P31-201ENST00000437242 AMMECR1Q9Y4X0 333 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms