RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 Q6ZUT4 128 aa11.97□□□□□ -0.49
PTPN13-204ENST00000436978 LINC00173Q6ZV60 143 aa11.97□□□□□ -0.49
PTPN13-204ENST00000436978 TEN1Q86WV5 123 aa11.97□□□□□ -0.49
PTPN13-204ENST00000436978 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
PTPN13-204ENST00000436978 BDP1A6H8Y1 2624 aa11.96□□□□□ -0.49
PTPN13-204ENST00000436978 WFDC11Q8NEX6 87 aa11.96□□□□□ -0.49
PTPN13-204ENST00000436978 LINC00269Q8N2A0 174 aa11.96□□□□□ -0.49
PTPN13-204ENST00000436978 AGRNO00468 2067 aa11.96□□□□□ -0.49
PTPN13-204ENST00000436978 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
PTPN13-204ENST00000436978 DEFB1P60022 68 aa11.95□□□□□ -0.5
PTPN13-204ENST00000436978 FAM222AQ5U5X8 452 aa11.95□□□□□ -0.5
PTPN13-204ENST00000436978 PTPN13Q12923 2485 aa11.95□□□□□ -0.5
PTPN13-204ENST00000436978 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
PTPN13-204ENST00000436978 SORL1Q92673 2214 aa11.95□□□□□ -0.5
PTPN13-204ENST00000436978 PSMG3-AS1Q96PY0 264 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 H3BT86 120 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 LECT2O14960 151 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 WISP2O76076 250 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 PSMB8P28062 276 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 TRBV10-2A0A0K0K1G8 114 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 A0A1B0GXF2 115 aa11.94□□□□□ -0.5
PTPN13-204ENST00000436978 Q6ZTI0 123 aa11.93□□□□□ -0.5
PTPN13-204ENST00000436978 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
PTPN13-204ENST00000436978 ACACBO00763 2458 aa11.93□□□□□ -0.5
PTPN13-204ENST00000436978 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
PTPN13-204ENST00000436978 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
PTPN13-204ENST00000436978 FXYD2P54710 66 aa11.92□□□□□ -0.5
PTPN13-204ENST00000436978 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
PTPN13-204ENST00000436978 PROP1O75360 226 aa11.91□□□□□ -0.5
PTPN13-204ENST00000436978 NUPR1O60356 82 aa11.91□□□□□ -0.5
PTPN13-204ENST00000436978 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
PTPN13-204ENST00000436978 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
PTPN13-204ENST00000436978 LY6G6DO95868 133 aa11.9□□□□□ -0.5
PTPN13-204ENST00000436978 Q6ZSV7 163 aa11.9□□□□□ -0.5
PTPN13-204ENST00000436978 RS1O15537 224 aa11.9□□□□□ -0.5
PTPN13-204ENST00000436978 CFAP126Q5VTH2 177 aa11.9□□□□□ -0.5
PTPN13-204ENST00000436978 LINC00467Q9BRT7 94 aa11.9□□□□□ -0.5
PTPN13-204ENST00000436978 ZNF80P51504 273 aaPredicted RBP11.9□□□□□ -0.5
PTPN13-204ENST00000436978 IGLC6P0CF74 106 aa11.9□□□□□ -0.51
PTPN13-204ENST00000436978 P0DMU3 169 aa11.9□□□□□ -0.51
PTPN13-204ENST00000436978 FAM231AP0DMU4 169 aa11.9□□□□□ -0.51
PTPN13-204ENST00000436978 FAM231CP0DMU5 169 aa11.9□□□□□ -0.51
PTPN13-204ENST00000436978 SPATA12Q7Z6I5 190 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 CLEC2BQ92478 149 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 H0Y9J4 135 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 WFDC9Q8NEX5 89 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 NAV3Q8IVL0 2385 aa11.89□□□□□ -0.51
PTPN13-204ENST00000436978 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
PTPN13-204ENST00000436978 TRAV10A0A0B4J240 114 aa11.88□□□□□ -0.51
PTPN13-204ENST00000436978 HIST2H2BDQ6DRA6 164 aa11.88□□□□□ -0.51
PTPN13-204ENST00000436978 ZNF702PQ9H963 129 aa11.87□□□□□ -0.51
PTPN13-204ENST00000436978 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
PTPN13-204ENST00000436978 IGKV3D-7A0A0C4DH55 119 aa11.87□□□□□ -0.51
PTPN13-204ENST00000436978 C14orf132Q9NPU4 83 aa11.86□□□□□ -0.51
PTPN13-204ENST00000436978 PTPRBP23467 1997 aa11.86□□□□□ -0.51
PTPN13-204ENST00000436978 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
PTPN13-204ENST00000436978 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 IBA57-AS1B1ANH7 110 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 TDRG1Q3Y452 100 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 MLST8Q9BVC4 326 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 BRWD1-AS2P59051 145 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 CDPF1Q6NVV7 123 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 SEC61GP60059 68 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
PTPN13-204ENST00000436978 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
PTPN13-204ENST00000436978 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 SPANXB1Q9NS25 103 aaPredicted RBP11.84□□□□□ -0.51
PTPN13-204ENST00000436978 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 C22orf34Q6ZV56 151 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 U3KQK5 164 aa11.84□□□□□ -0.51
PTPN13-204ENST00000436978 FOXI1Q12951 378 aa11.83□□□□□ -0.51
PTPN13-204ENST00000436978 TMEM223A0PJW6 202 aa11.83□□□□□ -0.52
PTPN13-204ENST00000436978 M0QY20 66 aa11.83□□□□□ -0.52
PTPN13-204ENST00000436978 Q6ZPA2 131 aa11.82□□□□□ -0.52
PTPN13-204ENST00000436978 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
PTPN13-204ENST00000436978 Q8N6K4 173 aa11.82□□□□□ -0.52
PTPN13-204ENST00000436978 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
PTPN13-204ENST00000436978 LINC00322Q6ZN03 302 aaPredicted RBP11.81□□□□□ -0.52
PTPN13-204ENST00000436978 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
PTPN13-204ENST00000436978 A0A087WZ39 114 aa11.81□□□□□ -0.52
PTPN13-204ENST00000436978 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
PTPN13-204ENST00000436978 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
PTPN13-204ENST00000436978 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
PTPN13-204ENST00000436978 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 UPK3BQ9BT76 320 aa11.79□□□□□ -0.52
PTPN13-204ENST00000436978 BPY2O14599 106 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 WFDC2Q14508 124 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 ZNF295-AS1Q8N0V1 137 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 HIGD2AQ9BW72 106 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms