RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 TIMM17AQ99595 171 aa5.56□□□□□ -1.52
SYNPO2-203ENST00000434046 ZFAND3Q9H8U3 227 aa5.56□□□□□ -1.52
SYNPO2-203ENST00000434046 KLK5Q9Y337 293 aaPredicted RBP5.56□□□□□ -1.52
SYNPO2-203ENST00000434046 POLQO75417 2590 aa5.56□□□□□ -1.52
SYNPO2-203ENST00000434046 H3BT86 120 aa5.56□□□□□ -1.52
SYNPO2-203ENST00000434046 IGHV4-4A0A075B6R2 117 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 TRAV12-2A0A075B6T6 113 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 IGIPA6NJ69 53 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 IGHV3-30-3P0DP02 117 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 TNFRSF18Q9Y5U5 241 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 PRRC2AP48634 2157 aaKnown RBP5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 WNK1Q9H4A3 2382 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 A8MZ25 164 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 CEMP1Q6PRD7 247 aaPredicted RBP5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 ZFAND2AQ8N6M9 145 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 KLK9Q9UKQ9 250 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 LRBAP50851 2863 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 IGHV4-59P01825 116 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 HERVK_113P63121 156 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 EBI3Q14213 229 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 CCDC140Q96MF4 163 aa5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 DAZ1Q9NQZ3 744 aaKnown RBP5.55□□□□□ -1.52
SYNPO2-203ENST00000434046 TRAV13-1A0A0B4J241 112 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 DEFB112Q30KQ8 113 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 MRPL53Q96EL3 112 aaKnown RBP5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 RELNP78509 3460 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 KNCNA6PVL3 124 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 I3L3M4 83 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 C11orf44Q8N8P7 122 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 DOPEY1Q5JWR5 2465 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 NDUFA4O00483 81 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 GPHB5Q86YW7 130 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 LENEPQ9Y5L5 61 aa5.54□□□□□ -1.52
SYNPO2-203ENST00000434046 CLPSL1A2RUU4 121 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 RNASE3P12724 160 aaKnown RBP5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 UNQ9165/PRO28630Q6UXU0 137 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 Q96MF0 132 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 SETD2Q9BYW2 2564 aaPredicted RBP5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 J3KT08 172 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 NDUFA7O95182 113 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 DNAL4O96015 105 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 SYNJ2BPP57105 145 aa5.53□□□□□ -1.52
SYNPO2-203ENST00000434046 POLR2KP53803 58 aaKnown RBP5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 C3orf22Q8N5N4 141 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 ABCA12Q86UK0 2595 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 A0A1W2PRX2 142 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 J3QLI3 93 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 RHOHQ15669 191 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 Q8N6K4 173 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 BRI3O95415 125 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 TRBV12-3P01733 135 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 HOXD3P31249 432 aaPredicted RBP5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 DCHS2Q6V1P9 2916 aa5.52□□□□□ -1.53
SYNPO2-203ENST00000434046 ASH1LQ9NR48 2969 aaKnown RBP5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 USP24Q9UPU5 2620 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 IGHV3OR16-12A0A075B7B8 117 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 hADV29S1A0JD25 119 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 UQCRQO14949 82 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 C20orf203Q8NBC4 194 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 H3BUA1 57 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 C5orf47Q569G3 176 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 ADAMTSL4-AS1Q5T5F5 129 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 ABCA2Q9BZC7 2435 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 LST1O00453 97 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 TRACP01848 142 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 IGHG2P01859 326 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 DNAJC30Q96LL9 226 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 PEMTQ9UBM1 199 aa5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
SYNPO2-203ENST00000434046 IGLV4-3A0A075B6K6 122 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 ACYP1P07311 99 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 MIAQ16674 131 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 LINC00643Q86TS7 51 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 HIVEP2P31629 2446 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 DAZ2Q13117 558 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 DEFB113Q30KQ7 82 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 DAZ4Q86SG3 579 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 LINC01587Q99440 93 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 DAZ3Q9NR90 486 aaKnown RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 IGKV3OR2-268A0A0C4DH90 116 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 A0A1B0GX51 115 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 A6NDX4 124 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 FAM19A5Q7Z5A7 132 aaPredicted RBP5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 PRIMA1Q86XR5 153 aa5.5□□□□□ -1.53
SYNPO2-203ENST00000434046 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
SYNPO2-203ENST00000434046 A0A087WW49 117 aa5.49□□□□□ -1.53
SYNPO2-203ENST00000434046 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
SYNPO2-203ENST00000434046 TRBV27A0A0K0K1C4 114 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms