RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FGF6P10767 208 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 TMEM61Q8N0U2 210 aa2.82□□□□□ -1.96
SHPRH-205ENST00000433355 OPRPNQ99935 248 aaPredicted RBP2.82□□□□□ -1.96
SHPRH-205ENST00000433355 C11orf68Q9H3H3 251 aaKnown RBP2.82□□□□□ -1.96
SHPRH-205ENST00000433355 RS1O15537 224 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00310P59036 64 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 ASPHD1Q5U4P2 390 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00474Q9P2X8 69 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LINC01620Q4KN68 170 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 Q8IZM0 81 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 CGB1A6NKQ9 187 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 SPART-AS1P0CW21 52 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 AMTNQ6UX39 209 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 SYNJ2BPP57105 145 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 C12orf74Q32Q52 190 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LINC00479Q96M42 142 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 JPT2Q9H910 190 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE12HA6NDE8 117 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 FUSP35637 526 aaKnown RBP eCLIP2.81□□□□□ -1.96
SHPRH-205ENST00000433355 BAALCQ8WXS3 180 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 ORMDL1Q9P0S3 153 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 ICOSQ9Y6W8 199 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 LOC389332A0A1B0GUA5 103 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 IGLV1-51P01701 117 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 IGKV3D-20A0A0C4DH25 116 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 CCL18P55774 89 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 HHLA3Q9XRX5 114 aa2.81□□□□□ -1.96
SHPRH-205ENST00000433355 TMEM256-PLSCR3K7ERE1 68 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 ZNF80P51504 273 aaPredicted RBP2.8□□□□□ -1.96
SHPRH-205ENST00000433355 PRR30Q53SZ7 412 aaPredicted RBP2.8□□□□□ -1.96
SHPRH-205ENST00000433355 OR13C6PQ8NH95 151 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 TRAV8-2A0A0B4J237 113 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 CR1P17927 2039 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 SUMO4Q6EEV6 95 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 CDPF1Q6NVV7 123 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 C2orf48Q96LS8 159 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 IGIPA6NJ69 53 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 G3V318 75 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 CD164L2Q6UWJ8 174 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 LST1O00453 97 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 PRR31Q5SQ13 230 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 NBEAL2Q6ZNJ1 2754 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV3-21A0A0B4J1V1 117 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 NDUFB1O75438 58 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV3-11P01762 117 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 GATA1P15976 413 aaPredicted RBP2.8□□□□□ -1.96
SHPRH-205ENST00000433355 C6orf226Q5I0X4 101 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 SHISA2Q6UWI4 295 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 RPL37AP61513 92 aaKnown RBP2.8□□□□□ -1.96
SHPRH-205ENST00000433355 C8orf49Q96NF6 230 aa2.8□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 CFAP126Q5VTH2 177 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 FLG2Q5D862 2391 aaPredicted RBP2.79□□□□□ -1.96
SHPRH-205ENST00000433355 PHLDA1Q8WV24 401 aaPredicted RBP2.79□□□□□ -1.96
SHPRH-205ENST00000433355 IGLV2-18A0A075B6J9 118 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 A0A0J9YY99 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 ANAPC13Q9BS18 74 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 RNF185Q96GF1 192 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 MRPL36Q9P0J6 103 aaKnown RBP2.79□□□□□ -1.96
SHPRH-205ENST00000433355 TACC2O95359 2948 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 TRAV12-3A0A0B4J271 114 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 TAX1BP3O14907 124 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE12JA6NER3 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 F8W735 103 aaPredicted RBP2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE7O76087 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE12FP0CL80 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE12GP0CL81 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE12IP0CL82 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 GAGE4Q13068 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 LY6EQ16553 131 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 C2orf91Q6ZV80 131 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 VWFP04275 2813 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 F6UB75 175 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 H3BTX0 84 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV3-30P01768 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 APELAP0DMC3 54 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 IGHV3-30-5P0DP03 117 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 DAD1P61803 113 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 ANKRD39Q53RE8 183 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 Q6JHZ5 121 aa2.79□□□□□ -1.96
SHPRH-205ENST00000433355 RNASE3P12724 160 aaKnown RBP2.78□□□□□ -1.96
SHPRH-205ENST00000433355 EMP1P54849 157 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 DEFB131AP59861 70 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 TMEM258P61165 79 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 TMEM219Q86XT9 240 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
SHPRH-205ENST00000433355 TSPAN13O95857 204 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 FOXI1Q12951 378 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 ETDBQ3ZM63 59 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 EGFEM1PQ0D2K5 195 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 DEFB112Q30KQ8 113 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 DNAJC9-AS1A6NH13 148 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 A8MZ25 164 aa2.78□□□□□ -1.96
SHPRH-205ENST00000433355 ZNF561-AS1K7EIQ3 104 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms