RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TMEM141Q96I45 108 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 FAM19A4Q96LR4 140 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 MINOS1-NBL1R4GNA1 71 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 PLXNB1O43157 2135 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 IGHV7-81A0A0B4J1V7 117 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 A0A0J9YX75 114 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 CRLF1O75462 422 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 NHLRC4P0CG21 123 aaPredicted RBP6.02□□□□□ -1.45
VTI1A-202ENST00000432306 UBE2E1P51965 193 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 FBXL19-AS1Q494R0 122 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 SCGB1D4Q6XE38 83 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 GPHB5Q86YW7 130 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 UBE2E2Q96LR5 201 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 LINC00477Q96M19 166 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 Q9HAA7 133 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 PRO1854Q9UHT4 67 aa6.02□□□□□ -1.45
VTI1A-202ENST00000432306 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
VTI1A-202ENST00000432306 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ABCA1O95477 2261 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 MALRD1Q5VYJ5 2156 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 TRAV21A0A0B4J279 112 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 LOC107984156A0A0G2JMH3 177 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 K7EMT4 169 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 TSHBP01222 138 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 PRB4P10163 310 aaPredicted RBP6.01□□□□□ -1.45
VTI1A-202ENST00000432306 POLR2KP53803 58 aaKnown RBP6.01□□□□□ -1.45
VTI1A-202ENST00000432306 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ARL17AQ8IVW1 177 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ANKRD29Q8N6D5 301 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ZFAND2AQ8N6M9 145 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ZNRF2Q8NHG8 242 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 S4R3C0 116 aa6.01□□□□□ -1.45
VTI1A-202ENST00000432306 A0A087WZ39 114 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 TRBV6-5A0A0K0K1A5 114 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 SLC25A20O43772 301 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 SCGB1C2P0DMR2 95 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 IGHV4-31P0DP07 118 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 ZNF876PQ49A33 203 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 Q6ZVQ6 151 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 KIF25-AS1Q9Y6Z4 181 aa6□□□□□ -1.45
VTI1A-202ENST00000432306 TRBV7-1A0A0A6YYK4 115 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 H3BVH4 76 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 IGHV1-69P01742 117 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 IGHV3-33P01772 117 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 RPL35AP18077 110 aaKnown RBP5.99□□□□□ -1.45
VTI1A-202ENST00000432306 LINC00315P59091 139 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 RNF182Q8N6D2 247 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 Q8N9W7 124 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 TMEM263Q8WUH6 116 aaKnown RBP5.99□□□□□ -1.45
VTI1A-202ENST00000432306 ARFGEF3Q5TH69 2177 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 ZANQ9Y493 2812 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 AGRNO00468 2067 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 SDHAF1A6NFY7 115 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 C15orf32Q32M92 178 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 PRR9Q5T870 116 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 METTL26Q96S19 204 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 PLCE1Q9P212 2302 aa5.99□□□□□ -1.45
VTI1A-202ENST00000432306 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
VTI1A-202ENST00000432306 TRBV30A0A0K0K1B3 111 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 LINC01548A6NM66 108 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 SOCS3O14543 225 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 OVOL1O14753 267 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 CRIP2P52943 208 aaPredicted RBP5.98□□□□□ -1.45
VTI1A-202ENST00000432306 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
VTI1A-202ENST00000432306 KLHL30-AS1Q8NEE0 82 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 LINC01560Q8TB33 94 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
VTI1A-202ENST00000432306 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.98□□□□□ -1.452e-6■□□□□ 8.2
VTI1A-202ENST00000432306 J3QQQ9 107 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 LEPROTO15243 131 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 DUSP14O95147 198 aaKnown RBP5.97□□□□□ -1.45
VTI1A-202ENST00000432306 RNASE3P12724 160 aaKnown RBP5.97□□□□□ -1.45
VTI1A-202ENST00000432306 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 PRB3Q04118 309 aaPredicted RBP5.97□□□□□ -1.45
VTI1A-202ENST00000432306 HES1Q14469 280 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 DEFB121Q5J5C9 76 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 PIK3CD-AS1Q5SR53 167 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 VMO1Q7Z5L0 202 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 C1orf158Q8N1D5 194 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 Q8N3U1 123 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 RPL39LQ96EH5 51 aaKnown RBP5.97□□□□□ -1.45
VTI1A-202ENST00000432306 ROS1P08922 2347 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 CR1P17927 2039 aa5.97□□□□□ -1.45
VTI1A-202ENST00000432306 TRBV10-2A0A0K0K1G8 114 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE12JA6NER3 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 SNCGO76070 127 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE7O76087 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 IGHV3-23P01764 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE12FP0CL80 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE12GP0CL81 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE12IP0CL82 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 GAGE4Q13068 117 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 RHOHQ15669 191 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 ATXN8Q156A1 80 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 NSUN5P1Q3KNT7 163 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 CCL19Q99731 98 aa5.96□□□□□ -1.45
VTI1A-202ENST00000432306 TMEM126AQ9H061 195 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms