RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 C2orf88Q9BSF0 95 aa2.48□□□□□ -2.01
NUDCD1-202ENST00000427660 UFC1Q9Y3C8 167 aa2.48□□□□□ -2.01
NUDCD1-202ENST00000427660 DNAJC13O75165 2243 aa2.48□□□□□ -2.01
NUDCD1-202ENST00000427660 CACNA1DQ01668 2161 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 FREM1Q5H8C1 2179 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 ZNF407Q9C0G0 2248 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 C7orf71A4D174 169 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 OR2T8A6NH00 312 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 K7EIM0 57 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 GPX1P07203 203 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 LYRM7Q5U5X0 104 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 ZNF705AQ6ZN79 300 aaPredicted RBP2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 C2orf91Q6ZV80 131 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 OR8I2Q8N0Y5 310 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 CCL19Q99731 98 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 MED13Q9UHV7 2174 aa2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 HEATR1Q9H583 2144 aaKnown RBP2.47□□□□□ -2.01
NUDCD1-202ENST00000427660 TRAV3A0A0B4J244 114 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 TRAV21A0A0B4J279 112 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 TMEM189A5PLL7 270 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 HIGD1CA8MV81 97 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 ZNF705FA8MVS1 300 aaPredicted RBP2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 MSMBP08118 114 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 RHOGP84095 191 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 COL5A1-AS1Q5SY13 56 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 LINC01545Q5VT33 79 aa2.46□□□□□ -2.01
NUDCD1-202ENST00000427660 SRCAPQ6ZRS2 3230 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 TRAV41A0A0B4J266 112 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 M0R2Z0 102 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 DLEU1O43261 78 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 LEPROTL1O95214 131 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 COX6B1P14854 86 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 CRYBA4P53673 196 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 MIAQ16674 131 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 PYY3Q5JQD4 70 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 UNQ5815/PRO19632Q6UWF5 114 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 C5orf56Q8N8D9 126 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 NUP35Q8NFH5 326 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 C10orf105Q8TEF2 133 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 TOMM6Q96B49 74 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 C20orf78Q9BR46 151 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 MRPL16Q9NX20 251 aaKnown RBP2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 ALPK2Q86TB3 2170 aa2.46□□□□□ -2.02
NUDCD1-202ENST00000427660 LINC01546A6NGU7 62 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 HBDP02042 147 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 ZNF705BP0CI00 300 aaPredicted RBP2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 SRIP30626 198 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 SNRPD3P62318 126 aaKnown RBP2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 SEC11AP67812 179 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 SPINK9Q5DT21 86 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 PATE2Q6UY27 113 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 C18orf32Q8TCD1 76 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 AP1S3Q96PC3 154 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 OTOGLQ3ZCN5 2332 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 KNL1Q8NG31 2342 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 BRCA2P51587 3418 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 A0A1W2PNM2 257 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 IGLV6-57P01721 117 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 PRM2P04554 102 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 PLNP26678 52 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 GOLT1AQ6ZVE7 132 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 OR4X2Q8NGF9 303 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 LEAP2Q969E1 77 aa2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 C11orf68Q9H3H3 251 aaKnown RBP2.45□□□□□ -2.02
NUDCD1-202ENST00000427660 LEPROTO15243 131 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 IGLC6P0CF74 106 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 SMIM17P0DL12 118 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 CBLN1P23435 193 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 HIST1H4AP62805 103 aaKnown RBP2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 HCP5Q6MZN7 132 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 SFTA2Q6UW10 78 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 HSPB9Q9BQS6 159 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 LINC00467Q9BRT7 94 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 DERL1Q9BUN8 251 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 ZDBF2Q9HCK1 2354 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 KIAA2026Q5HYC2 2103 aa2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 TNRC18O15417 2968 aaPredicted RBP2.44□□□□□ -2.02
NUDCD1-202ENST00000427660 AHCTF1Q8WYP5 2266 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 TRAV12-1A0A0B4J245 112 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 CTSGP08311 255 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 PYYP10082 97 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 ASIPP42127 132 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 BPESC1Q9GZL8 116 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 DPH3P1Q9H4G8 78 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 HIGD1BQ9P298 99 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 PRO0461Q9UI25 63 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 KNTC1P50748 2209 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 SYS1-DBNDD2H3BUS1 97 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 CKS2P33552 79 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 TDRG1Q3Y452 100 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 SPATA45Q537H7 98 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 C10orf55Q5SWW7 151 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 Q8N8P6 123 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 MYOZ3Q8TDC0 251 aa2.43□□□□□ -2.02
NUDCD1-202ENST00000427660 TMEM141Q96I45 108 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms