RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
ATG4B-209ENST00000425239 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
ATG4B-209ENST00000425239 LPAP08519 4548 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 TRBV20OR9-2A0A075B6H5 130 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 RAB19A4D1S5 217 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 CENPWQ5EE01 88 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
ATG4B-209ENST00000425239 TRAV1-1A0A0B4J248 108 aa9.37□□□□□ -0.91
ATG4B-209ENST00000425239 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
ATG4B-209ENST00000425239 F2Z2F3 143 aa9.37□□□□□ -0.91
ATG4B-209ENST00000425239 RPS10P46783 165 aaKnown RBP9.37□□□□□ -0.91
ATG4B-209ENST00000425239 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
ATG4B-209ENST00000425239 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
ATG4B-209ENST00000425239 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
ATG4B-209ENST00000425239 WDR73Q6P4I2 378 aa9.36□□□□□ -0.91
ATG4B-209ENST00000425239 SMIM12Q96EX1 92 aa9.36□□□□□ -0.91
ATG4B-209ENST00000425239 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
ATG4B-209ENST00000425239 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
ATG4B-209ENST00000425239 BCL2L11O43521 198 aa9.35□□□□□ -0.91
ATG4B-209ENST00000425239 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
ATG4B-209ENST00000425239 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
ATG4B-209ENST00000425239 MANBALQ9NQG1 85 aa9.35□□□□□ -0.91
ATG4B-209ENST00000425239 hCG_2014768A0A024R1R8 64 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
ATG4B-209ENST00000425239 CTRLP40313 264 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 AMTP48728 403 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
ATG4B-209ENST00000425239 COTL1Q14019 142 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 GNG13Q9P2W3 67 aa9.34□□□□□ -0.91
ATG4B-209ENST00000425239 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 SULT1A2P50226 295 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 FOXI1Q12951 378 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 MAJINQ3KP22 176 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-209ENST00000425239 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
ATG4B-209ENST00000425239 A0A096LNI7 61 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 UBE2L6O14933 153 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 IFNA1P01562 189 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 GNG4P50150 75 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 STPG4Q8N801 248 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
ATG4B-209ENST00000425239 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
ATG4B-209ENST00000425239 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
ATG4B-209ENST00000425239 IGKV3OR2-268A0A0C4DH90 116 aa9.3□□□□□ -0.92
ATG4B-209ENST00000425239 KANTRA0A1W2PQU2 76 aa9.3□□□□□ -0.92
ATG4B-209ENST00000425239 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
ATG4B-209ENST00000425239 FOXA3P55318 350 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-209ENST00000425239 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-209ENST00000425239 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
ATG4B-209ENST00000425239 RPL39LQ96EH5 51 aaKnown RBP9.3□□□□□ -0.92
ATG4B-209ENST00000425239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
ATG4B-209ENST00000425239 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
ATG4B-209ENST00000425239 H7C423 109 aa9.29□□□□□ -0.92
ATG4B-209ENST00000425239 NCR2O95944 276 aa9.29□□□□□ -0.92
ATG4B-209ENST00000425239 TWIST1Q15672 202 aa9.29□□□□□ -0.92
ATG4B-209ENST00000425239 SPINK6Q6UWN8 80 aa9.29□□□□□ -0.92
ATG4B-209ENST00000425239 K7EN84 100 aa9.28□□□□□ -0.92
ATG4B-209ENST00000425239 PDE6DO43924 150 aa9.28□□□□□ -0.92
ATG4B-209ENST00000425239 FGF6P10767 208 aa9.28□□□□□ -0.92
ATG4B-209ENST00000425239 EIF5AP63241 154 aaKnown RBP9.28□□□□□ -0.92
ATG4B-209ENST00000425239 MED9Q9NWA0 146 aa9.28□□□□□ -0.92
ATG4B-209ENST00000425239 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
ATG4B-209ENST00000425239 OCC1Q8TAD7 63 aa9.27□□□□□ -0.93
ATG4B-209ENST00000425239 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
ATG4B-209ENST00000425239 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.93
ATG4B-209ENST00000425239 LINC00959A0A1B0GUT2 108 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 ESDP10768 282 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 BIN3Q9NQY0 253 aa9.26□□□□□ -0.93
ATG4B-209ENST00000425239 TRBV6-5A0A0K0K1A5 114 aa9.25□□□□□ -0.93
ATG4B-209ENST00000425239 BCL2P10415 239 aa9.25□□□□□ -0.93
ATG4B-209ENST00000425239 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
ATG4B-209ENST00000425239 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
ATG4B-209ENST00000425239 RPP21Q9H633 154 aaKnown RBP9.25□□□□□ -0.93
ATG4B-209ENST00000425239 APCSP02743 223 aa9.24□□□□□ -0.93
ATG4B-209ENST00000425239 ZNF25P17030 456 aaPredicted RBP9.24□□□□□ -0.93
ATG4B-209ENST00000425239 XCL1P47992 114 aa9.24□□□□□ -0.93
ATG4B-209ENST00000425239 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
ATG4B-209ENST00000425239 CCL25O15444 150 aa9.23□□□□□ -0.93
ATG4B-209ENST00000425239 TSHBP01222 138 aa9.23□□□□□ -0.93
ATG4B-209ENST00000425239 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
ATG4B-209ENST00000425239 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 I3L3M4 83 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
ATG4B-209ENST00000425239 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 Q6ZRP5 223 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
ATG4B-209ENST00000425239 MUC2Q02817 5179 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms