RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 CRIP1P50238 77 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 HILS1P60008 231 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 UBE2D3P61077 147 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 UBE2D2P62837 147 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 LINC00173Q6ZV60 143 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 ZNF702PQ9H963 129 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 C2orf91Q6ZV80 131 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 DCANP1Q8TF63 244 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 MSRB1Q9NZV6 116 aa5.29□□□□□ -1.56
ALMS1-201ENST00000423048 PHF3Q92576 2039 aaKnown RBP5.29□□□□□ -1.56
ALMS1-201ENST00000423048 SERP2Q8N6R1 65 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 UBE2D4Q9Y2X8 147 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 TRAV10A0A0B4J240 114 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 K7ERJ3 54 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 NDUFV3P56181 108 aaKnown RBP5.28□□□□□ -1.56
ALMS1-201ENST00000423048 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 TCL1BO95988 128 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 RNASE3P12724 160 aaKnown RBP5.28□□□□□ -1.56
ALMS1-201ENST00000423048 EGFEM1PQ0D2K5 195 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 PRR31Q5SQ13 230 aa5.28□□□□□ -1.56
ALMS1-201ENST00000423048 LINC00322Q6ZN03 302 aaPredicted RBP5.28□□□□□ -1.56
ALMS1-201ENST00000423048 BLCAPP62952 87 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 ARID1AO14497 2285 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 CRYGDP07320 174 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 HEATR1Q9H583 2144 aaKnown RBP5.27□□□□□ -1.57
ALMS1-201ENST00000423048 DYSFO75923 2080 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 LY6HO94772 140 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 UNQ9165/PRO28630Q6UXU0 137 aa5.27□□□□□ -1.57
ALMS1-201ENST00000423048 XCL1P47992 114 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 REG3AQ06141 175 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 WFDC2Q14508 124 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 Q8N976 141 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 UPK3BQ9BT76 320 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 RPL18AQ02543 176 aaKnown RBP5.26□□□□□ -1.57
ALMS1-201ENST00000423048 FAM19A4Q96LR4 140 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 NAA38Q9BRA0 125 aaKnown RBP5.26□□□□□ -1.57
ALMS1-201ENST00000423048 ASXL3Q9C0F0 2248 aa5.26□□□□□ -1.57
ALMS1-201ENST00000423048 EP300Q09472 2414 aaPredicted RBP5.25□□□□□ -1.57
ALMS1-201ENST00000423048 LECT2O14960 151 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 DOCK9Q9BZ29 2069 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 IGLV2-18A0A075B6J9 118 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 IGKV2D-24A0A075B6R9 120 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 A0A087WZ39 114 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 FAM236AA0A1B0GUQ0 79 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 FAM236BA0A1B0GV22 79 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 CACNA1HO95180 2353 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 LOC107984640A0A0U1RRK4 108 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 MYO7BQ6PIF6 2116 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 FAM19A3Q7Z5A8 133 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 IGHV3-38A0A0C4DH36 116 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 A0A0U1RRA0 63 aa5.25□□□□□ -1.57
ALMS1-201ENST00000423048 COX7CP15954 63 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
ALMS1-201ENST00000423048 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
ALMS1-201ENST00000423048 AHCTF1Q8WYP5 2266 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 SDK2Q58EX2 2172 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 IGLV5-45A0A087WSX0 123 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 BPY2O14599 106 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 C20orf173Q96LM9 149 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 CDC42SE2Q9NRR3 84 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 H3BPC8 53 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 C1orf229Q6ZS94 237 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-201ENST00000423048 CHCHD10Q8WYQ3 142 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-201ENST00000423048 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
ALMS1-201ENST00000423048 PRB3Q04118 309 aaPredicted RBP5.24□□□□□ -1.57
ALMS1-201ENST00000423048 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 Q6ZSV7 163 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 CNTRLQ7Z7A1 2325 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 KNL1Q8NG31 2342 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 PRYO14603 147 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 RBX1P62877 108 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 C5orf38Q86SI9 138 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 TRBV7-7A0A0K0K1E9 115 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 FAM236DA0A1B0GTK5 79 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 A8MTW9 85 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 CCKP06307 115 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 FAM236CP0DP71 79 aa5.23□□□□□ -1.57
ALMS1-201ENST00000423048 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 TRIAP1O43715 76 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 IGLV1-51P01701 117 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 GRNP28799 593 aaKnown RBP5.22□□□□□ -1.57
ALMS1-201ENST00000423048 ZNF625Q96I27 306 aaPredicted RBP5.22□□□□□ -1.57
ALMS1-201ENST00000423048 SPTBN2O15020 2390 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 ACACBO00763 2458 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 C5orf47Q569G3 176 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 SYCNQ0VAF6 134 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 CDKN2A-AS1Q9UH64 79 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 CACNA1DQ01668 2161 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 SDK1Q7Z5N4 2213 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 GPR179Q6PRD1 2367 aa5.22□□□□□ -1.57
ALMS1-201ENST00000423048 LINC00959A0A1B0GUT2 108 aa5.21□□□□□ -1.57
ALMS1-201ENST00000423048 CXCL6P80162 114 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 C11orf45Q8TAV5 145 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 KIAA1549Q9HCM3 1950 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 LINC00310P59036 64 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 LINC00526Q96FQ7 95 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 ALPK2Q86TB3 2170 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms