RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 NIPBLQ6KC79 2804 aaeCLIP16.86■□□□□ 0.29
LSM8-203ENST00000422760 CRYBA4P53673 196 aa16.86■□□□□ 0.29
LSM8-203ENST00000422760 C20orf203Q8NBC4 194 aa16.84■□□□□ 0.29
LSM8-203ENST00000422760 LINC00467Q9BRT7 94 aa16.84■□□□□ 0.29
LSM8-203ENST00000422760 MORN3Q6PF18 240 aaPredicted RBP16.83■□□□□ 0.28
LSM8-203ENST00000422760 NDUFA11Q86Y39 141 aa16.83■□□□□ 0.28
LSM8-203ENST00000422760 RPL39P62891 51 aaKnown RBP16.82■□□□□ 0.28
LSM8-203ENST00000422760 LYRM7Q5U5X0 104 aa16.82■□□□□ 0.28
LSM8-203ENST00000422760 A8MWV9 139 aa16.82■□□□□ 0.28
LSM8-203ENST00000422760 SRSF9Q13242 221 aaKnown RBP eCLIP16.82■□□□□ 0.28
LSM8-203ENST00000422760 UBE2D1P51668 147 aa16.81■□□□□ 0.28
LSM8-203ENST00000422760 PYGO1Q9Y3Y4 419 aa16.81■□□□□ 0.28
LSM8-203ENST00000422760 IGLV1-51P01701 117 aa16.8■□□□□ 0.28
LSM8-203ENST00000422760 CLUHP3Q96NS8 147 aa16.8■□□□□ 0.28
LSM8-203ENST00000422760 CRLF1O75462 422 aa16.8■□□□□ 0.28
LSM8-203ENST00000422760 HTN1P15515 57 aa16.8■□□□□ 0.28
LSM8-203ENST00000422760 A0A0J9YY99 117 aa16.79■□□□□ 0.28
LSM8-203ENST00000422760 J3QR89 54 aa16.79■□□□□ 0.28
LSM8-203ENST00000422760 ZNF415Q09FC8 603 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 TMEM170BQ5T4T1 132 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 STHQ8IWL8 128 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 M0R2P5 195 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 INSP01308 110 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 SLC25A29Q8N8R3 303 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 JMJD1CQ15652 2540 aa16.78■□□□□ 0.28
LSM8-203ENST00000422760 LEPROTO15243 131 aa16.77■□□□□ 0.28
LSM8-203ENST00000422760 FLNBO75369 2602 aaKnown RBP16.76■□□□□ 0.27
LSM8-203ENST00000422760 RHODO00212 210 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 LGALS3P17931 250 aaKnown RBP16.76■□□□□ 0.27
LSM8-203ENST00000422760 ZNRF2Q8NHG8 242 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 J3QQQ9 107 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 PF4P02776 101 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 P0DMU3 169 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 FAM231AP0DMU4 169 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 FAM231CP0DMU5 169 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 COTL1Q14019 142 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 PLEKHB2Q96CS7 222 aa16.76■□□□□ 0.27
LSM8-203ENST00000422760 PRM2P04554 102 aa16.75■□□□□ 0.27
LSM8-203ENST00000422760 SPXQ9BT56 116 aa16.75■□□□□ 0.27
LSM8-203ENST00000422760 VCX2Q9H322 139 aa16.75■□□□□ 0.27
LSM8-203ENST00000422760 MRPL16Q9NX20 251 aaKnown RBP16.74■□□□□ 0.27
LSM8-203ENST00000422760 TMEM223A0PJW6 202 aa16.74■□□□□ 0.27
LSM8-203ENST00000422760 GAGE13Q4V321 117 aa16.74■□□□□ 0.27
LSM8-203ENST00000422760 DNAJC30Q96LL9 226 aa16.74■□□□□ 0.27
LSM8-203ENST00000422760 XCL2Q9UBD3 114 aa16.74■□□□□ 0.27
LSM8-203ENST00000422760 LINC00482Q8N8I6 264 aa16.73■□□□□ 0.27
LSM8-203ENST00000422760 LINC01587Q99440 93 aa16.73■□□□□ 0.27
LSM8-203ENST00000422760 PGPEP1Q9NXJ5 209 aa16.73■□□□□ 0.27
LSM8-203ENST00000422760 IGLV4-3A0A075B6K6 122 aa16.72■□□□□ 0.27
LSM8-203ENST00000422760 CMC4P56277 68 aaPredicted RBP16.72■□□□□ 0.27
LSM8-203ENST00000422760 RPL24P83731 157 aaKnown RBP16.72■□□□□ 0.27
LSM8-203ENST00000422760 TNFRSF18Q9Y5U5 241 aa16.72■□□□□ 0.27
LSM8-203ENST00000422760 F8P00451 2351 aa16.71■□□□□ 0.27
LSM8-203ENST00000422760 BEAN1Q3B7T3 259 aa16.71■□□□□ 0.27
LSM8-203ENST00000422760 AMELXQ99217 191 aa16.71■□□□□ 0.27
LSM8-203ENST00000422760 FAM110AQ9BQ89 295 aa16.71■□□□□ 0.27
LSM8-203ENST00000422760 WFDC10AQ9H1F0 79 aa16.71■□□□□ 0.27
LSM8-203ENST00000422760 IGHV3-30P01768 117 aa16.7■□□□□ 0.26
LSM8-203ENST00000422760 IGHV3-30-5P0DP03 117 aa16.7■□□□□ 0.26
LSM8-203ENST00000422760 EMP1P54849 157 aa16.7■□□□□ 0.26
LSM8-203ENST00000422760 SPANXA1Q9NS26 97 aa16.7■□□□□ 0.26
LSM8-203ENST00000422760 C11orf72Q8NBR9 251 aa16.69■□□□□ 0.26
LSM8-203ENST00000422760 C19orf73Q9NVV2 129 aa16.69■□□□□ 0.26
LSM8-203ENST00000422760 H3BMG7 143 aa16.68■□□□□ 0.26
LSM8-203ENST00000422760 ZNF22P17026 224 aaPredicted RBP16.68■□□□□ 0.26
LSM8-203ENST00000422760 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.68■□□□□ 0.26
LSM8-203ENST00000422760 TRBV20-1A0A075B6N2 111 aa16.68■□□□□ 0.26
LSM8-203ENST00000422760 TEX48A0A1B0GUV7 120 aa16.68■□□□□ 0.26
LSM8-203ENST00000422760 UBE2D3P61077 147 aa16.68■□□□□ 0.26
LSM8-203ENST00000422760 UBE2D2P62837 147 aa16.68■□□□□ 0.26
LSM8-203ENST00000422760 TSPEAR-AS2P59090 65 aa16.67■□□□□ 0.26
LSM8-203ENST00000422760 MRPS36P82909 103 aaKnown RBP16.67■□□□□ 0.26
LSM8-203ENST00000422760 C1orf158Q8N1D5 194 aa16.67■□□□□ 0.26
LSM8-203ENST00000422760 ATP6V0E2Q8NHE4 81 aa16.67■□□□□ 0.26
LSM8-203ENST00000422760 PRO0461Q9UI25 63 aa16.67■□□□□ 0.26
LSM8-203ENST00000422760 TENM1Q9UKZ4 2725 aa16.67■□□□□ 0.26
LSM8-203ENST00000422760 TMEM238C9JI98 176 aa16.66■□□□□ 0.26
LSM8-203ENST00000422760 TSPAN13O95857 204 aa16.66■□□□□ 0.26
LSM8-203ENST00000422760 C21orf62-AS1Q17RA5 79 aa16.66■□□□□ 0.26
LSM8-203ENST00000422760 NACAE9PAV3 2078 aa16.66■□□□□ 0.26
LSM8-203ENST00000422760 IGHV3-53P01767 116 aa16.65■□□□□ 0.26
LSM8-203ENST00000422760 IGHV3OR16-12A0A075B7B8 117 aa16.64■□□□□ 0.26
LSM8-203ENST00000422760 WFDC2Q14508 124 aa16.64■□□□□ 0.26
LSM8-203ENST00000422760 C10orf126Q8N4M7 172 aa16.64■□□□□ 0.26
LSM8-203ENST00000422760 CFAP126Q5VTH2 177 aa16.64■□□□□ 0.25
LSM8-203ENST00000422760 VWFP04275 2813 aa16.64■□□□□ 0.25
LSM8-203ENST00000422760 PRO1854Q9UHT4 67 aa16.63■□□□□ 0.25
LSM8-203ENST00000422760 AZU1P20160 251 aa16.62■□□□□ 0.25
LSM8-203ENST00000422760 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.62■□□□□ 0.25
LSM8-203ENST00000422760 RS1O15537 224 aa16.62■□□□□ 0.25
LSM8-203ENST00000422760 GIG44P09565 113 aaPredicted RBP16.62■□□□□ 0.25
LSM8-203ENST00000422760 ATRQ13535 2644 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 A0A0B4J2C4 111 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 A0A0J9YXV3 536 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 TINCRA0A1B0GVN0 87 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 RPL35AP18077 110 aaKnown RBP16.61■□□□□ 0.25
LSM8-203ENST00000422760 SPATA3Q8NHX4 192 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 OPRPNQ99935 248 aaPredicted RBP16.61■□□□□ 0.25
LSM8-203ENST00000422760 NOTCH3Q9UM47 2321 aa16.61■□□□□ 0.25
LSM8-203ENST00000422760 APOMO95445 188 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms