RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
SYNGAP1-202ENST00000418600 NCR3O14931 201 aa12.62□□□□□ -0.39
SYNGAP1-202ENST00000418600 K7EP13 123 aa12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 NTN5Q8WTR8 489 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 IGLV1-51P01701 117 aa12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 JMJD7-PLA2G4BH0Y9G9 81 aa12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 C1orf229Q6ZS94 237 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 Q8N976 141 aa12.61□□□□□ -0.39
SYNGAP1-202ENST00000418600 PRRC2AP48634 2157 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-202ENST00000418600 LECT2O14960 151 aa12.6□□□□□ -0.39
SYNGAP1-202ENST00000418600 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
SYNGAP1-202ENST00000418600 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
SYNGAP1-202ENST00000418600 ACACBO00763 2458 aa12.6□□□□□ -0.39
SYNGAP1-202ENST00000418600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.392e-16■■■□□ 15.2
SYNGAP1-202ENST00000418600 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
SYNGAP1-202ENST00000418600 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.39
SYNGAP1-202ENST00000418600 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 CHCHD10Q8WYQ3 142 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 NOTCH2Q04721 2471 aa12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 SMIM20Q8N5G0 67 aa12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 WFDC9Q8NEX5 89 aa12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 COL4A2P08572 1712 aa12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 LINC00322Q6ZN03 302 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-202ENST00000418600 PDE6GP18545 87 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 PLA2G2EQ9NZK7 142 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 ODF1Q14990 250 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 C5orf47Q569G3 176 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 GDF5OSQ5U4N7 250 aa12.57□□□□□ -0.4
SYNGAP1-202ENST00000418600 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 H3BMG7 143 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 A0A0B4J2C4 111 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 MED12LQ86YW9 2145 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 H7C423 109 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 PROK1P58294 105 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 IGHV1-58A0A0C4DH39 117 aa12.56□□□□□ -0.4
SYNGAP1-202ENST00000418600 K7EN84 100 aa12.55□□□□□ -0.4
SYNGAP1-202ENST00000418600 K7ERJ3 54 aa12.55□□□□□ -0.4
SYNGAP1-202ENST00000418600 MIAQ16674 131 aa12.55□□□□□ -0.4
SYNGAP1-202ENST00000418600 FAM167A-AS1Q96KT0 104 aa12.55□□□□□ -0.4
SYNGAP1-202ENST00000418600 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
SYNGAP1-202ENST00000418600 IGKV1D-37A0A075B6S9 117 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 LELP1Q5T871 98 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 FAM19A5Q7Z5A7 132 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
SYNGAP1-202ENST00000418600 LINC00474Q9P2X8 69 aa12.53□□□□□ -0.4
SYNGAP1-202ENST00000418600 RS1O15537 224 aa12.53□□□□□ -0.4
SYNGAP1-202ENST00000418600 FAM19A1Q7Z5A9 133 aa12.53□□□□□ -0.4
SYNGAP1-202ENST00000418600 MUSTN1Q8IVN3 82 aa12.53□□□□□ -0.4
SYNGAP1-202ENST00000418600 C14orf132Q9NPU4 83 aa12.53□□□□□ -0.4
SYNGAP1-202ENST00000418600 SPATA3Q8NHX4 192 aa12.52□□□□□ -0.4
SYNGAP1-202ENST00000418600 UBE2D4Q9Y2X8 147 aa12.52□□□□□ -0.4
SYNGAP1-202ENST00000418600 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.4
SYNGAP1-202ENST00000418600 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.41
SYNGAP1-202ENST00000418600 ATOX1O00244 68 aa12.51□□□□□ -0.41
SYNGAP1-202ENST00000418600 TMEM256-PLSCR3K7ERE1 68 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 TOMM6Q96B49 74 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 COX7BP24311 80 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 H0Y9J4 135 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 FHL3Q13643 280 aa12.5□□□□□ -0.41
SYNGAP1-202ENST00000418600 Q6ZTC4 211 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 HIGD2AQ9BW72 106 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 C11orf86A6NJI1 115 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
SYNGAP1-202ENST00000418600 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
SYNGAP1-202ENST00000418600 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
SYNGAP1-202ENST00000418600 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
SYNGAP1-202ENST00000418600 RPL39P62891 51 aaKnown RBP12.47□□□□□ -0.41
SYNGAP1-202ENST00000418600 NDUFC2O95298 119 aa12.47□□□□□ -0.41
SYNGAP1-202ENST00000418600 A4D1N5 150 aa12.47□□□□□ -0.41
SYNGAP1-202ENST00000418600 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.41
SYNGAP1-202ENST00000418600 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.41
SYNGAP1-202ENST00000418600 ZNF706Q9Y5V0 76 aaPredicted RBP12.46□□□□□ -0.41
SYNGAP1-202ENST00000418600 IGF2RP11717 2491 aa12.46□□□□□ -0.41
SYNGAP1-202ENST00000418600 MRGPRG-AS1Q2M3A8 158 aa12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 PCP2Q8IVA1 136 aa12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 ANKHD1Q8IWZ3 2542 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 MUC7Q8TAX7 377 aa12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
SYNGAP1-202ENST00000418600 UBE2D3P61077 147 aa12.44□□□□□ -0.42
SYNGAP1-202ENST00000418600 TDRG1Q3Y452 100 aa12.44□□□□□ -0.42
SYNGAP1-202ENST00000418600 CTRLP40313 264 aa12.44□□□□□ -0.42
SYNGAP1-202ENST00000418600 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
SYNGAP1-202ENST00000418600 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-202ENST00000418600 CASC2Q6XLA1 102 aa12.43□□□□□ -0.42
SYNGAP1-202ENST00000418600 EIF4EBP1Q13541 118 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-202ENST00000418600 EML5Q05BV3 1969 aa12.43□□□□□ -0.42
SYNGAP1-202ENST00000418600 E9PLD3 99 aa12.43□□□□□ -0.42
SYNGAP1-202ENST00000418600 Q6ZUT4 128 aa12.43□□□□□ -0.42
SYNGAP1-202ENST00000418600 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 MDFIQ99750 246 aa12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 P0C879 139 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms