RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 FAM216BQ8N7L0 139 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 SLC25A29Q8N8R3 303 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 NKAPP1Q8N9T2 125 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 TMEM141Q96I45 108 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 TIMM17AQ99595 171 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 CCL13Q99616 98 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 TM2D3Q9BRN9 247 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 TMEM243Q9BU79 118 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 SMIM2Q9BVW6 85 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 C11orf68Q9H3H3 251 aaKnown RBP2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 MRPL35Q9NZE8 188 aaKnown RBP2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 LINC00527Q9UJ94 153 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 TNCP24821 2201 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 KIAA0100Q14667 2235 aaKnown RBP2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 DOCK10Q96BY6 2186 aa2.51□□□□□ -2.01
HMGB3P23-201ENST00000414981 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGLV11-55A0A075B6I3 123 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-64DA0A0J9YX35 117 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRBV30A0A0K0K1B3 111 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 FAM236AA0A1B0GUQ0 79 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 FAM236BA0A1B0GV22 79 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 SDHAF1A6NFY7 115 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 C11orf86A6NJI1 115 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 H3BT86 120 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 K7ERJ3 54 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 LST1O00453 97 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 DUSP14O95147 198 aaKnown RBP2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 TFF1P04155 84 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 INAFM2P0DMQ5 153 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 IFITM1P13164 125 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 HES1Q14469 280 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 ATXN8Q156A1 80 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 DEFB121Q5J5C9 76 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 C10orf55Q5SWW7 151 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 HCP5Q6MZN7 132 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGFL3Q6UXB1 125 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 NDUFA11Q86Y39 141 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 LINC00167Q96N53 147 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 SCGB3A1Q96QR1 104 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 C21orf62Q9NYP8 219 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 TIMM8BQ9Y5J9 83 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P23-201ENST00000414981 A0A0J9YY99 117 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRBV10-2A0A0K0K1G8 114 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 A8MUN3 132 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 M0R1W7 72 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 MT-ATP8P03928 68 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 COX6CP09669 75 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 CCL3L1P16619 93 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 EBI3Q14213 229 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 AMTNQ6UX39 209 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 PRR15Q8IV56 129 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 C3orf22Q8N5N4 141 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 DPH3P1Q9H4G8 78 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 CHD7Q9P2D1 2997 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 ZNF706Q9Y5V0 76 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 CNTRLQ7Z7A1 2325 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 BRWD1Q9NSI6 2320 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 DSCAMO60469 2012 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 DNAJC13O75165 2243 aa2.49□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRANK1O15050 2925 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRBV7-1A0A0A6YYK4 115 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRAV41A0A0B4J266 112 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRAV21A0A0B4J279 112 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 LOC107984156A0A0G2JMH3 177 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV7-4-1A0A0J9YVY3 117 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRBV6-5A0A0K0K1A5 114 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TRBV7-7A0A0K0K1E9 115 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 M0R2P5 195 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 M0R3E3 92 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 SLC25A20O43772 301 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TCL1BO95988 128 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV1-69P01742 117 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-48P01763 117 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-30P01768 117 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-30-5P0DP03 117 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 ZNF80P51504 273 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 CXCL6P80162 114 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 RHOHQ15669 191 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 MEIG1Q5JSS6 88 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 C9orf129Q5T035 196 aaKnown RBP2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TMEM170BQ5T4T1 132 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 MINOS1Q5TGZ0 78 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 SPANXN1Q5VSR9 72 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 ARL17AQ8IVW1 177 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 TMEM61Q8N0U2 210 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 DEFB108BQ8NET1 73 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 DCANP1Q8TF63 244 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 COPS9Q8WXC6 57 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 UTRNP46939 3433 aa2.48□□□□□ -2.01
HMGB3P23-201ENST00000414981 CHD9Q3L8U1 2897 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 PRR14LQ5THK1 2151 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGKV2-40A0A087WW87 121 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-35A0A0C4DH35 117 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 A0A0J9YXY3 114 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms