RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 KRTAP10-1P60331 282 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 Q0VG73 95 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 C10orf91Q5T1B1 145 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 FRZBQ92765 325 aa12.47□□□□□ -0.41
TRIM56-202ENST00000412507 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
TRIM56-202ENST00000412507 CARHSP1Q9Y2V2 147 aaKnown RBP12.47□□□□□ -0.41
TRIM56-202ENST00000412507 CRPP02741 224 aa12.46□□□□□ -0.41
TRIM56-202ENST00000412507 ADCYAP1P18509 176 aa12.46□□□□□ -0.41
TRIM56-202ENST00000412507 GCSHP23434 173 aa12.46□□□□□ -0.41
TRIM56-202ENST00000412507 RBX1P62877 108 aa12.46□□□□□ -0.41
TRIM56-202ENST00000412507 NTN5Q8WTR8 489 aaPredicted RBP12.46□□□□□ -0.41
TRIM56-202ENST00000412507 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
TRIM56-202ENST00000412507 COTL1Q14019 142 aa12.44□□□□□ -0.42
TRIM56-202ENST00000412507 NUP35Q8NFH5 326 aa12.44□□□□□ -0.42
TRIM56-202ENST00000412507 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
TRIM56-202ENST00000412507 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
TRIM56-202ENST00000412507 C1orf43Q9BWL3 253 aa12.43□□□□□ -0.42
TRIM56-202ENST00000412507 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
TRIM56-202ENST00000412507 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
TRIM56-202ENST00000412507 AMTP48728 403 aa12.42□□□□□ -0.42
TRIM56-202ENST00000412507 RIGQ13278 110 aa12.42□□□□□ -0.42
TRIM56-202ENST00000412507 SVBPQ8N300 66 aa12.42□□□□□ -0.42
TRIM56-202ENST00000412507 ABCA13Q86UQ4 5058 aa12.42□□□□□ -0.42
TRIM56-202ENST00000412507 PCLOQ9Y6V0 5065 aa12.42□□□□□ -0.42
TRIM56-202ENST00000412507 DNAH8Q96JB1 4490 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.41□□□□□ -0.42
TRIM56-202ENST00000412507 GAS8-AS1O95177 125 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 APOC3P02656 99 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 MIAQ16674 131 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 RNF185Q96GF1 192 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 PRR34Q9NV39 138 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
TRIM56-202ENST00000412507 SDHAF1A6NFY7 115 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 UBE2L6O14933 153 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 RAB4AP20338 218 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 XGP55808 180 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 AMN1Q8IY45 258 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 C20orf203Q8NBC4 194 aa12.4□□□□□ -0.42
TRIM56-202ENST00000412507 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 SNAPINO95295 136 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 S100A1P23297 94 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 Q8N1X5 172 aa12.39□□□□□ -0.43
TRIM56-202ENST00000412507 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 PPP1R2P9O14990 202 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 ATP6V1G1O75348 118 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 REG3AQ06141 175 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 RHEBQ15382 184 aa12.38□□□□□ -0.43
TRIM56-202ENST00000412507 NCR2O95944 276 aa12.37□□□□□ -0.43
TRIM56-202ENST00000412507 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
TRIM56-202ENST00000412507 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
TRIM56-202ENST00000412507 ANAPC16Q96DE5 110 aa12.37□□□□□ -0.43
TRIM56-202ENST00000412507 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
TRIM56-202ENST00000412507 SMKR1H3BMG3 65 aa12.36□□□□□ -0.43
TRIM56-202ENST00000412507 I3L3M4 83 aa12.36□□□□□ -0.43
TRIM56-202ENST00000412507 APCSP02743 223 aa12.36□□□□□ -0.43
TRIM56-202ENST00000412507 PMCHP20382 165 aa12.36□□□□□ -0.43
TRIM56-202ENST00000412507 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
TRIM56-202ENST00000412507 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
TRIM56-202ENST00000412507 IGLV10-54A0A075B6I4 117 aa12.35□□□□□ -0.43
TRIM56-202ENST00000412507 CAMPP49913 170 aa12.35□□□□□ -0.43
TRIM56-202ENST00000412507 KRTAP26-1Q6PEX3 210 aa12.35□□□□□ -0.43
TRIM56-202ENST00000412507 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
TRIM56-202ENST00000412507 CTDSP1Q9GZU7 261 aa12.35□□□□□ -0.43
TRIM56-202ENST00000412507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-202ENST00000412507 IGKV2-29A2NJV5 120 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-202ENST00000412507 HAMPP81172 84 aa12.34□□□□□ -0.43
TRIM56-202ENST00000412507 USP17L23D6RBM5 183 aa12.33□□□□□ -0.44
TRIM56-202ENST00000412507 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
TRIM56-202ENST00000412507 LINC01620Q4KN68 170 aa12.33□□□□□ -0.44
TRIM56-202ENST00000412507 TMEM242Q9NWH2 141 aa12.33□□□□□ -0.44
TRIM56-202ENST00000412507 FAM30AQ9NZY2 134 aa12.33□□□□□ -0.44
TRIM56-202ENST00000412507 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 TSHBP01222 138 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 C14orf177Q52M58 125 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 FAM104BQ5XKR9 115 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 MRPL54Q6P161 138 aaKnown RBP12.32□□□□□ -0.44
TRIM56-202ENST00000412507 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
TRIM56-202ENST00000412507 RPS10P5Q9NQ39 176 aa12.32□□□□□ -0.44
TRIM56-202ENST00000412507 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
TRIM56-202ENST00000412507 A0A1B0GW15 77 aa12.31□□□□□ -0.44
TRIM56-202ENST00000412507 H7C423 109 aa12.31□□□□□ -0.44
TRIM56-202ENST00000412507 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
TRIM56-202ENST00000412507 NRACQ8N912 160 aa12.31□□□□□ -0.44
TRIM56-202ENST00000412507 IGKV3OR2-268A0A0C4DH90 116 aa12.3□□□□□ -0.44
TRIM56-202ENST00000412507 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
TRIM56-202ENST00000412507 FGF6P10767 208 aa12.3□□□□□ -0.44
TRIM56-202ENST00000412507 FAT1Q14517 4588 aa12.29□□□□□ -0.44
TRIM56-202ENST00000412507 SMR3BP02814 79 aaPredicted RBP12.29□□□□□ -0.44
TRIM56-202ENST00000412507 ESDP10768 282 aa12.29□□□□□ -0.44
TRIM56-202ENST00000412507 HBBP68871 147 aa12.29□□□□□ -0.44
TRIM56-202ENST00000412507 A0A1B0GXF2 115 aa12.28□□□□□ -0.44
TRIM56-202ENST00000412507 PPP1R17O96001 155 aa12.28□□□□□ -0.44
TRIM56-202ENST00000412507 PRSS1P07477 247 aa12.28□□□□□ -0.44
TRIM56-202ENST00000412507 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
TRIM56-202ENST00000412507 IMMP2LQ96T52 175 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms