RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NCMAPQ5T1S8 102 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 NRAPQ86VF7 1730 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 WFDC10AQ9H1F0 79 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 SBF2Q86WG5 1849 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 UGGT2Q9NYU1 1516 aa2.21□□□□□ -2.06
LSM5-205ENST00000409952 KIAA0100Q14667 2235 aaKnown RBP2.21□□□□□ -2.06
LSM5-205ENST00000409952 SPTAN1Q13813 2472 aaKnown RBP2.2□□□□□ -2.06
LSM5-205ENST00000409952 ABCA2Q9BZC7 2435 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 TIAM2Q8IVF5 1701 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 PEAK1Q9H792 1746 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 NCOR2Q9Y618 2525 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 HELZ2Q9BYK8 2649 aaKnown RBP2.2□□□□□ -2.06
LSM5-205ENST00000409952 FAM24AA6NFZ4 105 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 TFF1P04155 84 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 TTC9CQ8N5M4 171 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 AQP10Q96PS8 301 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 DSCR8Q96T75 97 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 BAZ2BQ9UIF8 2168 aaKnown RBP2.2□□□□□ -2.06
LSM5-205ENST00000409952 CLTCL1P53675 1640 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 MED12LQ86YW9 2145 aa2.2□□□□□ -2.06
LSM5-205ENST00000409952 KIAA1549LQ6ZVL6 1849 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 EEA1Q15075 1411 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 ZFYVE26Q68DK2 2539 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 ARHGAP5Q13017 1502 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 TCRBV3S1A0A5B6 114 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 INSL4Q14641 139 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 IFI27L1Q96BM0 104 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 COL5A3P25940 1745 aaPredicted RBP2.19□□□□□ -2.06
LSM5-205ENST00000409952 LRRIQ1Q96JM4 1722 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 FMN2Q9NZ56 1722 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 CCDC18Q5T9S5 1454 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 ATG2AQ2TAZ0 1938 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 CEP192Q8TEP8 1941 aa2.19□□□□□ -2.06
LSM5-205ENST00000409952 PTPRZ1P23471 2315 aaPredicted RBP2.18□□□□□ -2.06
LSM5-205ENST00000409952 PCDH15Q96QU1 1955 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 DOCK10Q96BY6 2186 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 CCKP06307 115 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 S100A10P60903 97 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
LSM5-205ENST00000409952 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 C5orf38Q86SI9 138 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
LSM5-205ENST00000409952 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
LSM5-205ENST00000409952 ARFGEF1Q9Y6D6 1849 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 PLEKHH2Q8IVE3 1493 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 LAMA3Q16787 3333 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 DNAH12Q6ZR08 3092 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 CEP250Q9BV73 2442 aa2.18□□□□□ -2.06
LSM5-205ENST00000409952 COL14A1Q05707 1796 aaKnown RBP2.18□□□□□ -2.06
LSM5-205ENST00000409952 FREM1Q5H8C1 2179 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 RRBP1Q9P2E9 1410 aaKnown RBP2.17□□□□□ -2.06
LSM5-205ENST00000409952 PIEZO2Q9H5I5 2752 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 PARP4Q9UKK3 1724 aaKnown RBP2.17□□□□□ -2.06
LSM5-205ENST00000409952 HEATR1Q9H583 2144 aaKnown RBP2.17□□□□□ -2.06
LSM5-205ENST00000409952 SPATA45Q537H7 98 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 GDF5OSQ5U4N7 250 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 ADGRL2O95490 1459 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 ERVK-7P63135 1459 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 PLXNC1O60486 1568 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 AKAP12Q02952 1782 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 TRPM7Q96QT4 1865 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 SETD2Q9BYW2 2564 aaPredicted RBP2.17□□□□□ -2.06
LSM5-205ENST00000409952 REV3LO60673 3130 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 ITSN1Q15811 1721 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 ZNF609O15014 1411 aa2.17□□□□□ -2.06
LSM5-205ENST00000409952 CNOT1A5YKK6 2376 aaKnown RBP2.16□□□□□ -2.06
LSM5-205ENST00000409952 ARHGEF5Q12774 1597 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 NRXN1Q9ULB1 1477 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 TRAV12-3A0A0B4J271 114 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 HIGD1CA8MV81 97 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 TMEM262E9PQX1 116 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 KALRNO60229 2985 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 GNG2P59768 71 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 TEX15Q9BXT5 2789 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 KNDC1Q76NI1 1749 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 PAPPAQ13219 1627 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 ALPK2Q86TB3 2170 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 LMTK2Q8IWU2 1503 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 WDR87Q6ZQQ6 2873 aa2.16□□□□□ -2.06
LSM5-205ENST00000409952 TRBV6-7A0A0A0MS04 114 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 TRBV10-3A0A0K0K1G6 114 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 COL5A1-AS1Q5SY13 56 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 C4orf33Q8N1A6 199 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 DPH3P1Q9H4G8 78 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 GBF1Q92538 1859 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 TRPM2O94759 1503 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 HTTP42858 3142 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 PTPRFP10586 1907 aa2.15□□□□□ -2.07
LSM5-205ENST00000409952 USP34Q70CQ2 3546 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 POLQO75417 2590 aa2.14□□□□□ -2.07
LSM5-205ENST00000409952 FAM186AA6NE01 2351 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms