RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PRKDCP78527 4128 aaKnown RBP2.78□□□□□ -1.96
CLK1-203ENST00000409769 TMSB15BA0A087X1C1 80 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 TGIF2-C20orf24A0A0A6YYL0 155 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 A0A1B0GXF2 115 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 XKRY2A2RUG3 117 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 GRIFINA4D1Z8 144 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 COLCA2A8K830 154 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 PRM2P04554 102 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 ASIPP42127 132 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 DEFB135Q30KP9 77 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 KCNIP4Q6PIL6 250 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 FER1L6-AS1Q8NA97 138 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 OR10AG1Q8NH19 301 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 TMEM263Q8WUH6 116 aaKnown RBP2.78□□□□□ -1.96
CLK1-203ENST00000409769 PTH2Q96A98 100 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 LINC01587Q99440 93 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 NAGKQ9UJ70 344 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 GOLT1BQ9Y3E0 138 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 URGCP-MRPS24S4R325 110 aa2.78□□□□□ -1.96
CLK1-203ENST00000409769 A0A1B0GUT8 65 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 SMIM9A6NGZ8 99 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 F2Z2F3 143 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 H3BVH4 76 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 ARMS2P0C7Q2 107 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 S100PP25815 95 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 TCL1AP56279 114 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 CACNG7P62955 275 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 DAZ2Q13117 558 aaKnown RBP2.77□□□□□ -1.97
CLK1-203ENST00000409769 RRN3P1Q2M238 152 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 RASL11AQ6T310 242 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 LYZL1Q6UWQ5 148 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 ZNF493Q6ZR52 646 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 ATP5L2Q7Z4Y8 100 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 SBSPONQ8IVN8 264 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 Q8NAQ8 132 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 BTF3L4Q96K17 158 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 PGLYRP4Q96LB8 373 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 TP53TG1Q9Y2A0 90 aa2.77□□□□□ -1.97
CLK1-203ENST00000409769 A0A1B0GW15 77 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 M0R2P5 195 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 ZNF861PO60384 105 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 SPINK4O60575 86 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 NTF3P20783 257 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 S100A4P26447 101 aaKnown RBP2.76□□□□□ -1.97
CLK1-203ENST00000409769 LINC00315P59091 139 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 HBBP68871 147 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
CLK1-203ENST00000409769 TMEM136Q6ZRR5 245 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 ZFP82Q8N141 532 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 OR11H2Q8NH07 326 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 FAM210BQ96KR6 192 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 C18orf15Q96N68 181 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 TMEM208Q9BTX3 173 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 GNB1LQ9BYB4 327 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
CLK1-203ENST00000409769 MUC21A0A0G2JKD1 596 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 MUC21A0A140T8X8 626 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 M0R381 172 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 RS1O15537 224 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 HLA-DQA1P01909 254 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 CRYGDP07320 174 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 MIFP14174 115 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 HTN1P15515 57 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 RAB5AP20339 215 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 EVI2AP22794 236 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 SLAQ13239 276 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 COX19Q49B96 90 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 SPANXN1Q5VSR9 72 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 BORCS7Q96B45 105 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 RNF185Q96GF1 192 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 B9D2Q9BPU9 175 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 TPPP3Q9BW30 176 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 TMEM191AQ9H0A3 160 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 C11orf68Q9H3H3 251 aaKnown RBP2.75□□□□□ -1.97
CLK1-203ENST00000409769 RETNQ9HD89 108 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 NOP10Q9NPE3 64 aaKnown RBP2.75□□□□□ -1.97
CLK1-203ENST00000409769 PHLDA3Q9Y5J5 127 aa2.75□□□□□ -1.97
CLK1-203ENST00000409769 TIMM8BQ9Y5J9 83 aaPredicted RBP2.75□□□□□ -1.97
CLK1-203ENST00000409769 TRGV1A0A0A0MS02 117 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 TRAV4A0A0B4J268 109 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 LYRM9A8MSI8 78 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 A8MWV9 139 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 MT-ND6P03923 174 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 S100A8P05109 93 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 TRGC1P0CF51 173 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 RAB4AP20338 218 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 RPS10P46783 165 aaKnown RBP2.74□□□□□ -1.97
CLK1-203ENST00000409769 DEFB121Q5J5C9 76 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 CFAP126Q5VTH2 177 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 FAM104BQ5XKR9 115 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 Q6ZTI0 123 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 AMN1Q8IY45 258 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 AP1S3Q96PC3 154 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 PPDPFQ9H3Y8 114 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 EDA2RQ9HAV5 297 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms