RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CFAP126Q5VTH2 177 aa9.79□□□□□ -0.84
RNF43-201ENST00000407977 OBSL1O75147 1896 aa9.79□□□□□ -0.84
RNF43-201ENST00000407977 DEFB1P60022 68 aa9.78□□□□□ -0.84
RNF43-201ENST00000407977 MGAMO43451 1857 aa9.78□□□□□ -0.84
RNF43-201ENST00000407977 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
RNF43-201ENST00000407977 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
RNF43-201ENST00000407977 INSL3P51460 131 aa9.78□□□□□ -0.84
RNF43-201ENST00000407977 CRIP3Q6Q6R5 217 aa9.77□□□□□ -0.84
RNF43-201ENST00000407977 RNF185Q96GF1 192 aa9.77□□□□□ -0.84
RNF43-201ENST00000407977 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.84
RNF43-201ENST00000407977 TRBV27A0A0K0K1C4 114 aa9.77□□□□□ -0.85
RNF43-201ENST00000407977 MSMPQ1L6U9 139 aa9.77□□□□□ -0.85
RNF43-201ENST00000407977 NUP210Q8TEM1 1887 aaPredicted RBP9.77□□□□□ -0.85
RNF43-201ENST00000407977 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
RNF43-201ENST00000407977 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
RNF43-201ENST00000407977 H0Y9J4 135 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 IGF1P05019 195 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 Q6Q795 121 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 DENND4CQ5VZ89 1909 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 K7EQG2 157 aa9.76□□□□□ -0.85
RNF43-201ENST00000407977 PLXNB3Q9ULL4 1909 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 FRMPD3Q5JV73 1810 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 M0QY20 66 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 CRIP1P50238 77 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 LST1O00453 97 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 COX7CP15954 63 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 TNRC6BQ9UPQ9 1833 aaKnown RBP9.75□□□□□ -0.85
RNF43-201ENST00000407977 PCNX2A6NKB5 2137 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 J3QKU1 62 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 SPTSSBQ8NFR3 76 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
RNF43-201ENST00000407977 USP17L23D6RBM5 183 aa9.74□□□□□ -0.85
RNF43-201ENST00000407977 LRRC75A-AS1Q8N1F1 130 aa9.74□□□□□ -0.85
RNF43-201ENST00000407977 COL4A3Q01955 1670 aa9.74□□□□□ -0.85
RNF43-201ENST00000407977 TNFRSF13BO14836 293 aaPredicted RBP9.74□□□□□ -0.85
RNF43-201ENST00000407977 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
RNF43-201ENST00000407977 MPLKIPQ8TAP9 179 aa9.74□□□□□ -0.85
RNF43-201ENST00000407977 REG3AQ06141 175 aa9.73□□□□□ -0.85
RNF43-201ENST00000407977 ESM1Q9NQ30 184 aa9.73□□□□□ -0.85
RNF43-201ENST00000407977 EBI3Q14213 229 aa9.73□□□□□ -0.85
RNF43-201ENST00000407977 ADORA2A-AS1P86434 159 aa9.73□□□□□ -0.85
RNF43-201ENST00000407977 NOTCH4Q99466 2003 aa9.73□□□□□ -0.85
RNF43-201ENST00000407977 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
RNF43-201ENST00000407977 C14orf177Q52M58 125 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 PIK3CD-AS1Q5SR53 167 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 DEFB135Q30KP9 77 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
RNF43-201ENST00000407977 Q6ZTI0 123 aa9.71□□□□□ -0.85
RNF43-201ENST00000407977 LYRM9A8MSI8 78 aa9.71□□□□□ -0.85
RNF43-201ENST00000407977 IGKV4-1P06312 121 aa9.71□□□□□ -0.85
RNF43-201ENST00000407977 CHCHD10Q8WYQ3 142 aaPredicted RBP9.71□□□□□ -0.86
RNF43-201ENST00000407977 TNCP24821 2201 aa9.71□□□□□ -0.86
RNF43-201ENST00000407977 LINC00269Q8N2A0 174 aa9.71□□□□□ -0.86
RNF43-201ENST00000407977 NRACQ8N912 160 aa9.71□□□□□ -0.86
RNF43-201ENST00000407977 ARHGAP21Q5T5U3 1957 aa9.7□□□□□ -0.86
RNF43-201ENST00000407977 XGP55808 180 aa9.7□□□□□ -0.86
RNF43-201ENST00000407977 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
RNF43-201ENST00000407977 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
RNF43-201ENST00000407977 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
RNF43-201ENST00000407977 FREM1Q5H8C1 2179 aa9.7□□□□□ -0.86
RNF43-201ENST00000407977 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
RNF43-201ENST00000407977 C1orf229Q6ZS94 237 aaPredicted RBP9.69□□□□□ -0.86
RNF43-201ENST00000407977 PLA2G5P39877 138 aa9.69□□□□□ -0.86
RNF43-201ENST00000407977 C20orf173Q96LM9 149 aa9.69□□□□□ -0.86
RNF43-201ENST00000407977 SLPIP03973 132 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 Q6JHZ5 121 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 LMO4P61968 165 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 MUC7Q8TAX7 377 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
RNF43-201ENST00000407977 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
RNF43-201ENST00000407977 LY6LH3BQJ8 138 aa9.67□□□□□ -0.86
RNF43-201ENST00000407977 CCDC179H3BU77 68 aa9.67□□□□□ -0.86
RNF43-201ENST00000407977 KIR2DL5BQ8NHK3 375 aa9.67□□□□□ -0.86
RNF43-201ENST00000407977 CCKP06307 115 aa9.66□□□□□ -0.86
RNF43-201ENST00000407977 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
RNF43-201ENST00000407977 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
RNF43-201ENST00000407977 TSHBP01222 138 aa9.66□□□□□ -0.86
RNF43-201ENST00000407977 SMIM26A0A096LP01 95 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 DEFB114Q30KQ6 69 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 A0A0U1RQV1 116 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 K7ERS5 55 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 HIGD2AQ9BW72 106 aa9.65□□□□□ -0.86
RNF43-201ENST00000407977 LINC01548A6NM66 108 aa9.65□□□□□ -0.87
RNF43-201ENST00000407977 DSCAML1Q8TD84 2053 aa9.64□□□□□ -0.87
RNF43-201ENST00000407977 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
RNF43-201ENST00000407977 DEFB4AO15263 64 aa9.63□□□□□ -0.87
RNF43-201ENST00000407977 ANKHD1Q8IWZ3 2542 aaKnown RBP9.63□□□□□ -0.87
RNF43-201ENST00000407977 RNASE3P12724 160 aaKnown RBP9.63□□□□□ -0.87
RNF43-201ENST00000407977 Q8N976 141 aa9.63□□□□□ -0.87
RNF43-201ENST00000407977 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
RNF43-201ENST00000407977 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
RNF43-201ENST00000407977 KLLNB2CW77 178 aa9.62□□□□□ -0.87
RNF43-201ENST00000407977 LINC00310P59036 64 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms