RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PRB1P04280 392 aa12.17□□□□□ -0.46
CDK11B-204ENST00000407249 PAPPA-AS1Q5QFB9 102 aa12.17□□□□□ -0.46
CDK11B-204ENST00000407249 KIF25-AS1Q9Y6Z4 181 aa12.17□□□□□ -0.46
CDK11B-204ENST00000407249 IGHV4OR15-8A0A075B7B6 117 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 A0A087WW49 117 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 F6UB75 175 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 H3BMM0 161 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 NXPH4O95158 308 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 HERVK_113P61574 105 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 LINC01356Q8N9X3 169 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
CDK11B-204ENST00000407249 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 PSMB8P28062 276 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 NDUFA4O00483 81 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 IGHG2P01859 326 aa12.15□□□□□ -0.46
CDK11B-204ENST00000407249 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
CDK11B-204ENST00000407249 AVPP01185 164 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 Q6ZS46 218 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 H3BUX3 64 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 TSPEAR-AS2P59090 65 aa12.14□□□□□ -0.47
CDK11B-204ENST00000407249 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 MUC4Q99102 2169 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 ATOX1O00244 68 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 CFC1BP0CG36 223 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 CFC1P0CG37 223 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 RPL39P62891 51 aaKnown RBP12.13□□□□□ -0.47
CDK11B-204ENST00000407249 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
CDK11B-204ENST00000407249 TMEM141Q96I45 108 aa12.13□□□□□ -0.47
CDK11B-204ENST00000407249 ABCA2Q9BZC7 2435 aa12.12□□□□□ -0.47
CDK11B-204ENST00000407249 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
CDK11B-204ENST00000407249 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
CDK11B-204ENST00000407249 VCYO14598 125 aa12.12□□□□□ -0.47
CDK11B-204ENST00000407249 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
CDK11B-204ENST00000407249 A0A096LNT2 108 aa12.11□□□□□ -0.47
CDK11B-204ENST00000407249 SUMO4Q6EEV6 95 aa12.11□□□□□ -0.47
CDK11B-204ENST00000407249 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
CDK11B-204ENST00000407249 AMELXQ99217 191 aa12.11□□□□□ -0.47
CDK11B-204ENST00000407249 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
CDK11B-204ENST00000407249 IGKV3-7A0A075B6H7 116 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 CXCL5P42830 114 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 LY6EQ16553 131 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 KLLNB2CW77 178 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
CDK11B-204ENST00000407249 SDHAF1A6NFY7 115 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 NDUFC2O95298 119 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 C16orf95Q9H693 158 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 A0A087WWL8 130 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 Q96MF0 132 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 PRO1854Q9UHT4 67 aa12.09□□□□□ -0.47
CDK11B-204ENST00000407249 TRBV27A0A0K0K1C4 114 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 HIST1H4AP62805 103 aaKnown RBP12.08□□□□□ -0.48
CDK11B-204ENST00000407249 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 ACACBO00763 2458 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 F5H697 171 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 RHPN1-AS1Q9BWJ2 59 aa12.08□□□□□ -0.48
CDK11B-204ENST00000407249 TRBV10-2A0A0K0K1G8 114 aa12.07□□□□□ -0.48
CDK11B-204ENST00000407249 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
CDK11B-204ENST00000407249 ACYP1P07311 99 aa12.07□□□□□ -0.48
CDK11B-204ENST00000407249 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
CDK11B-204ENST00000407249 LINC00643Q86TS7 51 aa12.06□□□□□ -0.48
CDK11B-204ENST00000407249 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
CDK11B-204ENST00000407249 TRBV6-5A0A0K0K1A5 114 aa12.06□□□□□ -0.48
CDK11B-204ENST00000407249 IGLV1-40P01703 118 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
CDK11B-204ENST00000407249 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
CDK11B-204ENST00000407249 PMAIP1Q13794 54 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 BRK1Q8WUW1 75 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 AKAP6Q13023 2319 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 CD164Q04900 197 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CDK11B-204ENST00000407249 NDUFC2-KCTD14E9PQ53 114 aa12.04□□□□□ -0.48
CDK11B-204ENST00000407249 CFHR3Q02985 330 aa12.04□□□□□ -0.48
CDK11B-204ENST00000407249 ATXN8Q156A1 80 aa12.04□□□□□ -0.48
CDK11B-204ENST00000407249 DEFB113Q30KQ7 82 aa12.04□□□□□ -0.48
CDK11B-204ENST00000407249 NPC2P61916 151 aa12.04□□□□□ -0.48
CDK11B-204ENST00000407249 DAZ1Q9NQZ3 744 aaKnown RBP12.04□□□□□ -0.48
CDK11B-204ENST00000407249 USP24Q9UPU5 2620 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
CDK11B-204ENST00000407249 FSHBP01225 129 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 P0DMU3 169 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 FAM231AP0DMU4 169 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 FAM231CP0DMU5 169 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 FAM74A4Q5TZK3 123 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 CELSR1Q9NYQ6 3014 aa12.03□□□□□ -0.48
CDK11B-204ENST00000407249 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms