RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 IGHV1-58A0A0C4DH39 117 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 LINC01548A6NM66 108 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 G3V318 75 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 J3QLI3 93 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 TIRAPP58753 221 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 ENHOQ6UWT2 76 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 VSIG2Q96IQ7 327 aa4.45□□□□□ -1.7
HDAC9-203ENST00000406072 ANKHD1Q8IWZ3 2542 aaKnown RBP4.45□□□□□ -1.7
HDAC9-203ENST00000406072 EDN2P20800 178 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 CXCL5P42830 114 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 SPRNQ5BIV9 151 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 C11orf71Q6IPW1 123 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 VMO1Q7Z5L0 202 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 C11orf44Q8N8P7 122 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 TMEM263Q8WUH6 116 aaKnown RBP4.44□□□□□ -1.7
HDAC9-203ENST00000406072 UPK3BQ9BT76 320 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 A0A087WVE0 104 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 BUB3O43684 328 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 NHLRC4P0CG21 123 aaPredicted RBP4.44□□□□□ -1.7
HDAC9-203ENST00000406072 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
HDAC9-203ENST00000406072 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 RETNQ9HD89 108 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 TEX22C9J3V5 150 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 LENEPQ9Y5L5 61 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 LY6HO94772 140 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 VPREB1P12018 145 aa4.44□□□□□ -1.7
HDAC9-203ENST00000406072 A0A0C4DFX4 3053 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 JMJD7-PLA2G4BH0Y9G9 81 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 OVOL3O00110 214 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 CTSGP08311 255 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 ZNF672Q499Z4 452 aaPredicted RBP4.43□□□□□ -1.7
HDAC9-203ENST00000406072 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 CCDC140Q96MF4 163 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 KAAG1Q9UBP8 84 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 FAM208BQ5VWN6 2430 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 TRGV4A0A0C4DH28 118 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 ATP6V0E1O15342 81 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 C20orf203Q8NBC4 194 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 IGLV2-23P01705 113 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 DEFB1P60022 68 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
HDAC9-203ENST00000406072 HIST2H2BCQ6DN03 193 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 HIST2H2BDQ6DRA6 164 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 NRACQ8N912 160 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 KIR2DL5BQ8NHK3 375 aa4.43□□□□□ -1.7
HDAC9-203ENST00000406072 TMEM223A0PJW6 202 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 NCR3O14931 201 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
HDAC9-203ENST00000406072 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 ACACBO00763 2458 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 IGHV1-69P01742 117 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 FHL3Q13643 280 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 COX7B2Q8TF08 81 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
HDAC9-203ENST00000406072 SETD2Q9BYW2 2564 aaPredicted RBP4.42□□□□□ -1.7
HDAC9-203ENST00000406072 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
HDAC9-203ENST00000406072 SOSTDC1Q6X4U4 206 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 WFDC9Q8NEX5 89 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
HDAC9-203ENST00000406072 PYGO1Q9Y3Y4 419 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 SLPIP03973 132 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 ELANEP08246 267 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 ZFHX4Q86UP3 3567 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 NOTCH2Q04721 2471 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.41□□□□□ -1.7
HDAC9-203ENST00000406072 A8MZ25 164 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 CGB3P0DN86 165 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 CGB7P0DN87 165 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 Q6ZSV7 163 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 PIEZO2Q9H5I5 2752 aa4.41□□□□□ -1.7
HDAC9-203ENST00000406072 IGLV11-55A0A075B6I3 123 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 C9orf47Q6ZRZ4 202 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 MIR7-3HGQ8N6C7 128 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 F8WEM9 126 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 FUSP35637 526 aaKnown RBP eCLIP4.4□□□□□ -1.7
HDAC9-203ENST00000406072 ZNF843Q8N446 348 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.7
HDAC9-203ENST00000406072 CRYGAP11844 174 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 PIK3CD-AS1Q5SR53 167 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 MINOS1Q5TGZ0 78 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 C22orf34Q6ZV56 151 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 PIP4P2Q8N4L2 257 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 UBE2E2Q96LR5 201 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 CTSZQ9UBR2 303 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 MINOS1-NBL1R4GNA1 71 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 VPS13AQ96RL7 3174 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 CDKN2A-AS1Q9UH64 79 aa4.4□□□□□ -1.71
HDAC9-203ENST00000406072 DOPEY1Q5JWR5 2465 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 PRRC2CQ9Y520 2896 aaKnown RBP4.39□□□□□ -1.71
HDAC9-203ENST00000406072 MUC6Q6W4X9 2439 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 E7EQL1 145 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 TSPEAR-AS2P59090 65 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 IGF1P05019 195 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms