RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RBAKDNA6NC62 111 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 SIVA1O15304 175 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 ELANEP08246 267 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 CFHR3Q02985 330 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 ADAMTSL5Q6ZMM2 481 aa3.75□□□□□ -1.81
SMAD4-202ENST00000398417 CD28P10747 220 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 GAGE13Q4V321 117 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 SPINK13Q1W4C9 94 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 C2orf91Q6ZV80 131 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 DEFB131AP59861 70 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 C12orf74Q32Q52 190 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 RNF223E7ERA6 249 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 CEND1Q8N111 149 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 H3BT86 120 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 DUSP14O95147 198 aaKnown RBP3.74□□□□□ -1.81
SMAD4-202ENST00000398417 CSNK1G2-AS1Q8NCQ2 148 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 B4DSR2 109 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 RS1O15537 224 aa3.74□□□□□ -1.81
SMAD4-202ENST00000398417 OPRPNQ99935 248 aaPredicted RBP3.74□□□□□ -1.81
SMAD4-202ENST00000398417 TRBV25-1A0A075B6N4 114 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 F8WEM9 126 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 DOPEY1Q5JWR5 2465 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 USMG5Q96IX5 58 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 MP68P56378 58 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
SMAD4-202ENST00000398417 MYMXA0A1B0GTQ4 84 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 PLEKHB2Q96CS7 222 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 KLHL30-AS1Q8NEE0 82 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 M0R2P5 195 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 CRYGDP07320 174 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 IGLV5-45A0A087WSX0 123 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV1OR15-1A0A075B7D0 117 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV3-16A0A0C4DH30 117 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 NUPR2A6NF83 97 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 LINC01549A6NIU2 74 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 ZFP2Q6ZN57 461 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 H3BMG7 143 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 RPL39P62891 51 aaKnown RBP3.72□□□□□ -1.81
SMAD4-202ENST00000398417 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 C3orf56Q8N813 242 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 SDHAF1A6NFY7 115 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 AVPP01185 164 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
SMAD4-202ENST00000398417 CLPSL2Q6UWE3 100 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 TSSC4Q9Y5U2 329 aaPredicted RBP3.72□□□□□ -1.81
SMAD4-202ENST00000398417 NCOR2Q9Y618 2525 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 HIVEP2P31629 2446 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 FGF6P10767 208 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 RASL10AQ92737 203 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 DSPP15924 2871 aaKnown RBP3.72□□□□□ -1.81
SMAD4-202ENST00000398417 TRGV1A0A0A0MS02 117 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 GAGE12HA6NDE8 117 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 Q8N1Y9 231 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 RNF152Q8N8N0 203 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 J3QL48 77 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 PLNP26678 52 aa3.72□□□□□ -1.81
SMAD4-202ENST00000398417 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.81
SMAD4-202ENST00000398417 A0A087WW49 117 aa3.71□□□□□ -1.81
SMAD4-202ENST00000398417 C4orf48Q5BLP8 95 aa3.71□□□□□ -1.81
SMAD4-202ENST00000398417 DEFB105AQ8NG35 78 aa3.71□□□□□ -1.81
SMAD4-202ENST00000398417 CXCL6P80162 114 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 C20orf78Q9BR46 151 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 C1orf158Q8N1D5 194 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 TOMM6Q96B49 74 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 F5H768 121 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 ACACBO00763 2458 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 H3BUA1 57 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 IGHG2P01859 326 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 DEFB136Q30KP8 78 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 PAPPA-AS1Q5QFB9 102 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 TIMM21Q9BVV7 248 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 A0A0J9YXV3 536 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 FAM222AQ5U5X8 452 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 LINC01356Q8N9X3 169 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 AZU1P20160 251 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 ZFAND2AQ8N6M9 145 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 PRORYQ9H606 182 aa3.71□□□□□ -1.82
SMAD4-202ENST00000398417 SLURP1P55000 103 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 CACNA1AO00555 2505 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 HAMPP81172 84 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 WFDC2Q14508 124 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 ETDBQ3ZM63 59 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 CEMP1Q6PRD7 247 aaPredicted RBP3.7□□□□□ -1.82
SMAD4-202ENST00000398417 APRG1Q8IVJ8 170 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 SERP1Q9Y6X1 66 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 TRAV12-1A0A0B4J245 112 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 F8VRH5 84 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 TRPT1Q86TN4 253 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms