RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 GTSF1LQ9H1H1 148 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
PTPRD-206ENST00000397617 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
PTPRD-206ENST00000397617 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 RPL36ALQ969Q0 106 aaKnown RBP4.31□□□□□ -1.72
PTPRD-206ENST00000397617 CHAC1Q9BUX1 264 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 JPT2Q9H910 190 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 C11orf72Q8NBR9 251 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 LYRM9A8MSI8 78 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 TMEM170BQ5T4T1 132 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 SNHG12Q9BXW3 62 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 KRTAP10-9P60411 292 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 TMEM258P61165 79 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 C9orf66Q5T8R8 295 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 UBE2DNLQ8IWF7 75 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 FAM19A2Q8N3H0 131 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 C20orf173Q96LM9 149 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 IGKCP01834 107 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 FRMD6-AS1P0C7T7 363 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 A0A1B0GWB2 263 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 RS1O15537 224 aa4.31□□□□□ -1.72
PTPRD-206ENST00000397617 H3BNG1 76 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 TFPI2P48307 235 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 DEFB131AP59861 70 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 ZC2HC1BQ5TFG8 222 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 STHQ8IWL8 128 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 S4R3C0 116 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 AMELXQ99217 191 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 IGHV3OR16-12A0A075B7B8 117 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 TMSB15BA0A087X1C1 80 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 K7EP13 123 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 Q8N1Y9 231 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 TMEM158Q8WZ71 300 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 SCGB3A1Q96QR1 104 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 LINC01587Q99440 93 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 PRO1933Q9H354 126 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 ADAMTSL5Q6ZMM2 481 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 PRR9Q5T870 116 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 FGF6P10767 208 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 PRB3Q04118 309 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-206ENST00000397617 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 SPATA25Q9BR10 227 aa4.3□□□□□ -1.72
PTPRD-206ENST00000397617 RNASE8Q8TDE3 154 aaKnown RBP4.29□□□□□ -1.72
PTPRD-206ENST00000397617 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 UFSP1Q6NVU6 142 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 C14orf178Q8N769 122 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-206ENST00000397617 NHP2Q9NX24 153 aaKnown RBP4.29□□□□□ -1.72
PTPRD-206ENST00000397617 TRGV4A0A0C4DH28 118 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 ATP6V0E2Q8NHE4 81 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 CST9LQ9H4G1 147 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 M0QXV9 152 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 C19orf73Q9NVV2 129 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 LINC00527Q9UJ94 153 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 SPCS1Q9Y6A9 102 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 TENM3Q9P273 2699 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 MRPL23Q16540 153 aaKnown RBP4.29□□□□□ -1.72
PTPRD-206ENST00000397617 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 MSRB1Q9NZV6 116 aa4.29□□□□□ -1.72
PTPRD-206ENST00000397617 TRBV7-3A0A075B6L6 115 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 J3KRW8 73 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 APOC4P55056 127 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 IGHV3-74A0A0B4J1X5 117 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 DMDP11532 3685 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 TRAV8-6A0A0B4J262 113 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 H7C2G1 150 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 SPRY2O43597 315 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 IGHV3-23P01764 117 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 MIFP14174 115 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 Q6ZS46 218 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 LINC00482Q8N8I6 264 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 ZFHX4Q86UP3 3567 aa4.28□□□□□ -1.72
PTPRD-206ENST00000397617 PSCAO43653 123 aa4.28□□□□□ -1.73
PTPRD-206ENST00000397617 TRAV8-4A0A0B4J246 113 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 ESM1Q9NQ30 184 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 IGHV3-49A0A0A0MS15 119 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 AZU1P20160 251 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 CD300EQ496F6 205 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-206ENST00000397617 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 ADARB2-AS1A8MUL3 147 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 F8WDY8 70 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 PRB1P04280 392 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE5Q13069 117 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 GAGE6Q13070 117 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 MRPL35Q9NZE8 188 aaKnown RBP4.27□□□□□ -1.73
PTPRD-206ENST00000397617 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-206ENST00000397617 MRAPQ8TCY5 172 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 A0A1W2PRX2 142 aa4.27□□□□□ -1.73
PTPRD-206ENST00000397617 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
PTPRD-206ENST00000397617 HERVK_113P63121 156 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms