RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 APOBP04114 4563 aaKnown RBP11.55□□□□□ -0.56
UPK3A-202ENST00000396082 C9JQL5 133 aa11.55□□□□□ -0.56
UPK3A-202ENST00000396082 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
UPK3A-202ENST00000396082 SRSF3P84103 164 aaKnown RBP11.55□□□□□ -0.56
UPK3A-202ENST00000396082 LINC00269Q8N2A0 174 aa11.55□□□□□ -0.56
UPK3A-202ENST00000396082 KRTAP4-5Q9BYR2 181 aa11.55□□□□□ -0.56
UPK3A-202ENST00000396082 V9GYV3 84 aa11.55□□□□□ -0.56
UPK3A-202ENST00000396082 KRTAP17-1Q9BYP8 105 aa11.54□□□□□ -0.56
UPK3A-202ENST00000396082 RIGQ13278 110 aa11.53□□□□□ -0.56
UPK3A-202ENST00000396082 TMEM191AQ9H0A3 160 aa11.53□□□□□ -0.56
UPK3A-202ENST00000396082 SDHAF1A6NFY7 115 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 XGP55808 180 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 REG3AQ06141 175 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 NUP35Q8NFH5 326 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 PRR34Q9NV39 138 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
UPK3A-202ENST00000396082 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
UPK3A-202ENST00000396082 APCSP02743 223 aa11.51□□□□□ -0.57
UPK3A-202ENST00000396082 RAB14P61106 215 aa11.51□□□□□ -0.57
UPK3A-202ENST00000396082 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
UPK3A-202ENST00000396082 IGLV4-60A0A075B6I1 120 aa11.5□□□□□ -0.57
UPK3A-202ENST00000396082 NCR2O95944 276 aa11.5□□□□□ -0.57
UPK3A-202ENST00000396082 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
UPK3A-202ENST00000396082 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 PMCHP20382 165 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 HAMPP81172 84 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 PCLOQ9Y6V0 5065 aa11.49□□□□□ -0.57
UPK3A-202ENST00000396082 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
UPK3A-202ENST00000396082 I3L3M4 83 aa11.48□□□□□ -0.57
UPK3A-202ENST00000396082 RAB4AP20338 218 aa11.48□□□□□ -0.57
UPK3A-202ENST00000396082 RNF185Q96GF1 192 aa11.48□□□□□ -0.57
UPK3A-202ENST00000396082 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
UPK3A-202ENST00000396082 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
UPK3A-202ENST00000396082 GAS8-AS1O95177 125 aa11.47□□□□□ -0.57
UPK3A-202ENST00000396082 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
UPK3A-202ENST00000396082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.57
UPK3A-202ENST00000396082 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
UPK3A-202ENST00000396082 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.57
UPK3A-202ENST00000396082 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
UPK3A-202ENST00000396082 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
UPK3A-202ENST00000396082 H7C423 109 aa11.45□□□□□ -0.58
UPK3A-202ENST00000396082 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
UPK3A-202ENST00000396082 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
UPK3A-202ENST00000396082 CAMPP49913 170 aa11.45□□□□□ -0.58
UPK3A-202ENST00000396082 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
UPK3A-202ENST00000396082 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
UPK3A-202ENST00000396082 SMKR1H3BMG3 65 aa11.44□□□□□ -0.58
UPK3A-202ENST00000396082 A0A1B0GW15 77 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 PPP1R17O96001 155 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 FGF6P10767 208 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 Q5VSD8 79 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 BTF3L4Q96K17 158 aa11.43□□□□□ -0.58
UPK3A-202ENST00000396082 TSHBP01222 138 aa11.42□□□□□ -0.58
UPK3A-202ENST00000396082 S100A8P05109 93 aa11.42□□□□□ -0.58
UPK3A-202ENST00000396082 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
UPK3A-202ENST00000396082 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
UPK3A-202ENST00000396082 ABCA13Q86UQ4 5058 aa11.41□□□□□ -0.58
UPK3A-202ENST00000396082 PRSS1P07477 247 aa11.41□□□□□ -0.58
UPK3A-202ENST00000396082 ZNF25P17030 456 aaPredicted RBP11.41□□□□□ -0.58
UPK3A-202ENST00000396082 FCER1GP30273 86 aa11.41□□□□□ -0.58
UPK3A-202ENST00000396082 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
UPK3A-202ENST00000396082 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
UPK3A-202ENST00000396082 FAM104BQ5XKR9 115 aa11.41□□□□□ -0.58
UPK3A-202ENST00000396082 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 FAM229AH3BQW9 127 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 VCYO14598 125 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 SUMO2P61956 95 aaKnown RBP11.4□□□□□ -0.58
UPK3A-202ENST00000396082 HBBP68871 147 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 Q6ZSA8 131 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 CLRN3Q8NCR9 226 aa11.4□□□□□ -0.58
UPK3A-202ENST00000396082 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
UPK3A-202ENST00000396082 F8W036 122 aa11.39□□□□□ -0.59
UPK3A-202ENST00000396082 ESDP10768 282 aa11.39□□□□□ -0.59
UPK3A-202ENST00000396082 PNRC1Q12796 327 aaPredicted RBP11.39□□□□□ -0.59
UPK3A-202ENST00000396082 NRACQ8N912 160 aa11.39□□□□□ -0.59
UPK3A-202ENST00000396082 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
UPK3A-202ENST00000396082 hDV102S1A0JD36 115 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 LINC00862A6NCI5 91 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 GAGE12HA6NDE8 117 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 CKS2P33552 79 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 CLLU1Q5K131 121 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 KIR2DL4Q99706 377 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
UPK3A-202ENST00000396082 CHCHD10Q8WYQ3 142 aaPredicted RBP11.37□□□□□ -0.59
UPK3A-202ENST00000396082 MT-ND4LP03901 98 aa11.36□□□□□ -0.59
UPK3A-202ENST00000396082 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
UPK3A-202ENST00000396082 A0A1B0GXF2 115 aa11.35□□□□□ -0.59
UPK3A-202ENST00000396082 SMAGPQ0VAQ4 97 aa11.35□□□□□ -0.59
UPK3A-202ENST00000396082 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
UPK3A-202ENST00000396082 ATP5L2Q7Z4Y8 100 aa11.35□□□□□ -0.59
UPK3A-202ENST00000396082 ANAPC16Q96DE5 110 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms