RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 GYPEP15421 78 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 NANOS2P60321 138 aaKnown RBP9.62□□□□□ -0.87
VAPB-202ENST00000395802 UBE2D3P61077 147 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 UBE2D2P62837 147 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 GAGE1Q13065 139 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 GAGE4Q13068 117 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 GAGE5Q13069 117 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 COTL1Q14019 142 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 GAGE13Q4V321 117 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 MEGF8Q7Z7M0 2845 aa9.62□□□□□ -0.87
VAPB-202ENST00000395802 TENM3Q9P273 2699 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 SCGB1D1O95968 90 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
VAPB-202ENST00000395802 NUDT3O95989 172 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 CTAG1AP78358 180 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
VAPB-202ENST00000395802 HSPB8Q9UJY1 196 aa9.61□□□□□ -0.87
VAPB-202ENST00000395802 DNAH9Q9NYC9 4486 aa9.6□□□□□ -0.87
VAPB-202ENST00000395802 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
VAPB-202ENST00000395802 ICOSQ9Y6W8 199 aa9.6□□□□□ -0.87
VAPB-202ENST00000395802 A0A0J9YY99 117 aa9.59□□□□□ -0.87
VAPB-202ENST00000395802 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.88
VAPB-202ENST00000395802 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.88
VAPB-202ENST00000395802 ATP6V0E2Q8NHE4 81 aa9.59□□□□□ -0.88
VAPB-202ENST00000395802 VSIG2Q96IQ7 327 aa9.59□□□□□ -0.88
VAPB-202ENST00000395802 Q9UF83 564 aa9.59□□□□□ -0.88
VAPB-202ENST00000395802 LINC00694P0DN24 101 aa9.58□□□□□ -0.88
VAPB-202ENST00000395802 TEX43Q6ZNM6 134 aa9.58□□□□□ -0.88
VAPB-202ENST00000395802 NEGR1Q7Z3B1 354 aa9.58□□□□□ -0.88
VAPB-202ENST00000395802 SPATA12Q7Z6I5 190 aa9.58□□□□□ -0.88
VAPB-202ENST00000395802 PHLDA1Q8WV24 401 aaPredicted RBP9.58□□□□□ -0.88
VAPB-202ENST00000395802 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
VAPB-202ENST00000395802 PCP4L1A6NKN8 68 aa9.57□□□□□ -0.88
VAPB-202ENST00000395802 TSHBP01222 138 aa9.57□□□□□ -0.88
VAPB-202ENST00000395802 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
VAPB-202ENST00000395802 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
VAPB-202ENST00000395802 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
VAPB-202ENST00000395802 PRKDCP78527 4128 aaKnown RBP9.56□□□□□ -0.88
VAPB-202ENST00000395802 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
VAPB-202ENST00000395802 PET117Q6UWS5 81 aa9.56□□□□□ -0.88
VAPB-202ENST00000395802 C15orf53Q8NAA6 179 aa9.56□□□□□ -0.88
VAPB-202ENST00000395802 C2orf66Q6UXQ4 117 aa9.55□□□□□ -0.88
VAPB-202ENST00000395802 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
VAPB-202ENST00000395802 TOMM6Q96B49 74 aa9.55□□□□□ -0.88
VAPB-202ENST00000395802 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
VAPB-202ENST00000395802 H7C423 109 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 ATP5LO75964 103 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 STAB2Q8WWQ8 2551 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 UBE2L6O14933 153 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 ZNF664Q8N3J9 261 aa9.54□□□□□ -0.88
VAPB-202ENST00000395802 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
VAPB-202ENST00000395802 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
VAPB-202ENST00000395802 A0A096LPF7 62 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 H0Y8G0 127 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.52□□□□□ -0.89
VAPB-202ENST00000395802 NPSP0C0P6 89 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 TIRAPP58753 221 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 PKIAP61925 76 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 ERASQ7Z444 233 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 DEFB104AQ8WTQ1 72 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 TMEM141Q96I45 108 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 TMEM243Q9BU79 118 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 C20orf202A1L168 122 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 ATOH7Q8N100 152 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 TIMM17AQ99595 171 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 CHCHD7Q9BUK0 85 aa9.52□□□□□ -0.89
VAPB-202ENST00000395802 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
VAPB-202ENST00000395802 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
VAPB-202ENST00000395802 SPANXA1Q9NS26 97 aa9.51□□□□□ -0.89
VAPB-202ENST00000395802 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
VAPB-202ENST00000395802 LGALS9CQ6DKI2 356 aa9.5□□□□□ -0.89
VAPB-202ENST00000395802 DGAT2L7PQ6IED9 249 aa9.5□□□□□ -0.89
VAPB-202ENST00000395802 Q6ZN92 141 aa9.5□□□□□ -0.89
VAPB-202ENST00000395802 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
VAPB-202ENST00000395802 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
VAPB-202ENST00000395802 LELP1Q5T871 98 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 CHCHD5Q9BSY4 110 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 IGLL5B9A064 214 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 ZNF25P17030 456 aaPredicted RBP9.49□□□□□ -0.89
VAPB-202ENST00000395802 TCTAP57738 103 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
VAPB-202ENST00000395802 AMMECR1LQ6DCA0 310 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 PRO1933Q9H354 126 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 PAM16Q9Y3D7 125 aa9.49□□□□□ -0.89
VAPB-202ENST00000395802 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
VAPB-202ENST00000395802 IGIPA6NJ69 53 aa9.48□□□□□ -0.89
VAPB-202ENST00000395802 TSTD3H0UI37 97 aa9.48□□□□□ -0.89
VAPB-202ENST00000395802 PRSS1P07477 247 aa9.48□□□□□ -0.89
VAPB-202ENST00000395802 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms