RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 A0A0J9YXV3 536 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 OR5AL1P0C617 328 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 CEBPGP53567 150 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 RPS20P60866 119 aaKnown RBP9.95□□□□□ -0.82
SNCA-205ENST00000394991 RAB4BP61018 213 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 ZNF56Q15929 161 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
SNCA-205ENST00000394991 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
SNCA-205ENST00000394991 WDR73Q6P4I2 378 aa9.94□□□□□ -0.82
SNCA-205ENST00000394991 FER1L6-AS1Q8NA97 138 aa9.94□□□□□ -0.82
SNCA-205ENST00000394991 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
SNCA-205ENST00000394991 EIF5A2Q9GZV4 153 aaKnown RBP9.94□□□□□ -0.82
SNCA-205ENST00000394991 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
SNCA-205ENST00000394991 F5H697 171 aa9.93□□□□□ -0.82
SNCA-205ENST00000394991 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
SNCA-205ENST00000394991 TMEM250H0YL14 139 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 SMIM17P0DL12 118 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 REG3AQ06141 175 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 NUDT10Q8NFP7 164 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 NUDT11Q96G61 164 aa9.92□□□□□ -0.82
SNCA-205ENST00000394991 LPAP08519 4548 aa9.91□□□□□ -0.82
SNCA-205ENST00000394991 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
SNCA-205ENST00000394991 K7EN84 100 aa9.91□□□□□ -0.82
SNCA-205ENST00000394991 C20orf203Q8NBC4 194 aa9.91□□□□□ -0.82
SNCA-205ENST00000394991 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
SNCA-205ENST00000394991 RNASE7Q9H1E1 156 aaKnown RBP9.91□□□□□ -0.82
SNCA-205ENST00000394991 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
SNCA-205ENST00000394991 TRBV25-1A0A075B6N4 114 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 CACNG7P62955 275 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 TMEM97Q5BJF2 176 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 LYZL1Q6UWQ5 148 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.9□□□□□ -0.82
SNCA-205ENST00000394991 FAM210AQ96ND0 272 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
SNCA-205ENST00000394991 RPP21Q9H633 154 aaKnown RBP9.9□□□□□ -0.82
SNCA-205ENST00000394991 F2Z2F3 143 aa9.89□□□□□ -0.83
SNCA-205ENST00000394991 MGPP08493 103 aa9.89□□□□□ -0.83
SNCA-205ENST00000394991 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
SNCA-205ENST00000394991 GTSF1Q8WW33 167 aa9.89□□□□□ -0.83
SNCA-205ENST00000394991 COX6A2Q02221 97 aa9.88□□□□□ -0.83
SNCA-205ENST00000394991 SMIM7Q9BQ49 75 aa9.88□□□□□ -0.83
SNCA-205ENST00000394991 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
SNCA-205ENST00000394991 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
SNCA-205ENST00000394991 GATCO43716 136 aaKnown RBP9.87□□□□□ -0.83
SNCA-205ENST00000394991 SRP19P09132 144 aaKnown RBP9.87□□□□□ -0.83
SNCA-205ENST00000394991 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
SNCA-205ENST00000394991 TEX261Q6UWH6 196 aa9.87□□□□□ -0.83
SNCA-205ENST00000394991 C15orf56Q8N910 161 aa9.87□□□□□ -0.83
SNCA-205ENST00000394991 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
SNCA-205ENST00000394991 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
SNCA-205ENST00000394991 ZNF727A8MUV8 499 aa9.86□□□□□ -0.83
SNCA-205ENST00000394991 NTF3P20783 257 aa9.86□□□□□ -0.83
SNCA-205ENST00000394991 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
SNCA-205ENST00000394991 TRGC1P0CF51 173 aa9.85□□□□□ -0.83
SNCA-205ENST00000394991 TWIST1Q15672 202 aa9.85□□□□□ -0.83
SNCA-205ENST00000394991 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
SNCA-205ENST00000394991 STPG4Q8N801 248 aa9.85□□□□□ -0.83
SNCA-205ENST00000394991 LCE2BO14633 110 aa9.84□□□□□ -0.83
SNCA-205ENST00000394991 NDUFS6O75380 124 aaKnown RBP9.84□□□□□ -0.83
SNCA-205ENST00000394991 CTRLP40313 264 aa9.84□□□□□ -0.83
SNCA-205ENST00000394991 REG3GQ6UW15 175 aa9.84□□□□□ -0.83
SNCA-205ENST00000394991 A0A1B0GUV1 79 aa9.83□□□□□ -0.84
SNCA-205ENST00000394991 H7C1H1 209 aa9.83□□□□□ -0.84
SNCA-205ENST00000394991 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
SNCA-205ENST00000394991 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNCA-205ENST00000394991 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
SNCA-205ENST00000394991 SUMO4Q6EEV6 95 aa9.83□□□□□ -0.84
SNCA-205ENST00000394991 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
SNCA-205ENST00000394991 A0A096LNI7 61 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 A8MWL6 223 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 M0QY20 66 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 LINC01551Q86U37 167 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
SNCA-205ENST00000394991 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
SNCA-205ENST00000394991 PEA15Q15121 130 aa9.81□□□□□ -0.84
SNCA-205ENST00000394991 C9JQL5 133 aa9.8□□□□□ -0.84
SNCA-205ENST00000394991 SRSF3P84103 164 aaKnown RBP9.8□□□□□ -0.84
SNCA-205ENST00000394991 TMEM241Q24JQ0 296 aa9.8□□□□□ -0.84
SNCA-205ENST00000394991 RASL11AQ6T310 242 aa9.8□□□□□ -0.84
SNCA-205ENST00000394991 SMIM15Q7Z3B0 74 aa9.8□□□□□ -0.84
SNCA-205ENST00000394991 CNFNQ9BYD5 112 aa9.8□□□□□ -0.84
SNCA-205ENST00000394991 FAM74A3Q4VXF1 159 aa9.79□□□□□ -0.84
SNCA-205ENST00000394991 CT83Q5H943 113 aa9.79□□□□□ -0.84
SNCA-205ENST00000394991 BORCS7Q96B45 105 aa9.79□□□□□ -0.84
SNCA-205ENST00000394991 ADIRFQ15847 76 aa9.78□□□□□ -0.84
SNCA-205ENST00000394991 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
SNCA-205ENST00000394991 TSKUQ8WUA8 353 aa9.78□□□□□ -0.84
SNCA-205ENST00000394991 NIT2Q9NQR4 276 aa9.78□□□□□ -0.84
SNCA-205ENST00000394991 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
SNCA-205ENST00000394991 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
SNCA-205ENST00000394991 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
SNCA-205ENST00000394991 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
SNCA-205ENST00000394991 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
SNCA-205ENST00000394991 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
SNCA-205ENST00000394991 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms